RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 ARSAP15289 507 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 ERCC5P28715 1186 aaPredicted RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 SLC7A9P82251 487 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 NHLH1Q02575 133 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CETN1Q12798 172 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 MTF1Q14872 753 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 SNX30Q5VWJ9 437 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 ARHGAP17Q68EM7 881 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PDZD8Q8NEN9 1154 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 OVCA2Q8WZ82 227 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 FAM3CQ92520 227 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PRRX2Q99811 253 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 EBF3Q9H4W6 596 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CCSER2Q9H7U1 834 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 COMMD8Q9NX08 183 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 NDRG2Q9UN36 371 aaKnown RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 CACNA1IQ9P0X4 2223 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 SPECC1L-ADORA2AF8WAN1 911 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 TULP2O00295 520 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CYP26A1O43174 497 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 COCHO43405 550 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 TCF3P15923 654 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PFKLP17858 780 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CTHP32929 405 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PLA2G5P39877 138 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 KPNA1P52294 538 aaPredicted RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 KIF11P52732 1056 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 APBA1Q02410 837 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 GCNT1Q02742 428 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 RUNX3Q13761 415 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 TPD52L1Q16890 204 aaPredicted RBP12.53□□□□□ -0.4
CDC27-202ENST00000525495 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 ZSWIM1Q9BR11 485 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 OSBPL6Q9BZF3 934 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 THAP9Q9H5L6 903 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 CPQQ9Y646 472 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 WNT6Q9Y6F9 365 aa12.53□□□□□ -0.4
CDC27-202ENST00000525495 LEFTY2O00292 366 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 O00370 1275 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 MAN2B1O00754 1011 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 SCAMP3O14828 347 aaKnown RBP12.52□□□□□ -0.41
CDC27-202ENST00000525495 CD19P15391 556 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 SLC9A1P19634 815 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.41
CDC27-202ENST00000525495 PDE6CP51160 858 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 PTPN5P54829 565 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 YWHAEP62258 255 aaKnown RBP12.52□□□□□ -0.41
CDC27-202ENST00000525495 GOLGA7BQ2TAP0 167 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 EML3Q32P44 896 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 SGO2Q562F6 1265 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 HECTD3Q5T447 861 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.41
CDC27-202ENST00000525495 GJB7Q6PEY0 223 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 TRIM65Q6PJ69 517 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 PIGZQ86VD9 579 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 ANKRD52Q8NB46 1076 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 OSCP1Q8WVF1 389 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 CLDN23Q96B33 292 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
CDC27-202ENST00000525495 NELL2Q99435 816 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 LINC00597Q9H2U6 94 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 NMUR1Q9HB89 426 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.41
CDC27-202ENST00000525495 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 SCML2Q9UQR0 700 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
CDC27-202ENST00000525495 DMDP11532 3685 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 TBX18O95935 607 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 MBL2P11226 248 aaPredicted RBP12.51□□□□□ -0.41
CDC27-202ENST00000525495 VDRP11473 427 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 TUBP50607 506 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 ZNF132P52740 706 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 PDE4CQ08493 712 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 ANGPT1Q15389 498 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 MIIPQ5JXC2 388 aa12.51□□□□□ -0.41
CDC27-202ENST00000525495 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
CDC27-202ENST00000525495 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
CDC27-202ENST00000525495 RALGPS2Q86X27 583 aaPredicted RBP12.51□□□□□ -0.41
CDC27-202ENST00000525495 RBBP8NLQ8NC74 664 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms