RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TRIM68Q6AZZ1 485 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 FCRL6Q6DN72 434 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 TMC5Q6UXY8 1006 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 DPP8Q6V1X1 898 aaPredicted RBP5.9□□□□□ -1.46
USP47-204ENST00000525078 LIPIQ6XZB0 460 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 FAM126BQ8IXS8 530 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 ANKS4BQ8N8V4 417 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 GABPB2Q8TAK5 448 aaPredicted RBP5.9□□□□□ -1.46
USP47-204ENST00000525078 GDAP1Q8TB36 358 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 ZFPM2Q8WW38 1151 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 GBP5Q96PP8 586 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 TACO1Q9BSH4 297 aaKnown RBP5.9□□□□□ -1.46
USP47-204ENST00000525078 TTPALQ9BTX7 342 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 APOL6Q9BWW8 343 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 TRIM5Q9C035 493 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 ABCG4Q9H172 646 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 NDST4Q9H3R1 872 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 DEF6Q9H4E7 631 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 IL21RQ9HBE5 538 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 MRPL15Q9P015 296 aaKnown RBP5.9□□□□□ -1.46
USP47-204ENST00000525078 ARHGAP20Q9P2F6 1191 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 DKK4Q9UBT3 224 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 ANAPC5Q9UJX4 755 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 SNX11Q9Y5W9 270 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 FAM169AQ9Y6X4 670 aa5.9□□□□□ -1.46
USP47-204ENST00000525078 A0A1W2PQ09 198 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 TCRBV7S2A1N4TA0A589 114 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 HMX2A2RU54 273 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 KIF28PB7ZC32 967 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 PI4K2BG5E9Z4 385 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 INO80B-WBP1J3KQ70 363 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 RGS10O43665 173 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ALDH1A2O94788 518 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 RASAL1O95294 804 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 PIM1P11309 404 aaPredicted RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 PRKCHP24723 683 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 SLC5A2P31639 672 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ADCY8P40145 1251 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 THPOP40225 353 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ARL4AP40617 200 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 LMAN1P49257 510 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 MRE11P49959 708 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 PPP5CP53041 499 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 NKX3-2P78367 333 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 MRPS35P82673 323 aaKnown RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 TFCP2Q12800 502 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 MYO1EQ12965 1108 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 STILQ15468 1287 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 NPY5RQ15761 445 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 KYNUQ16719 465 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 INO80CQ6PI98 192 aaPredicted RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 CNSTQ6PJW8 725 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 LINC00114Q6XXX2 140 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 GALNT7Q86SF2 657 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ALYREFQ86V81 257 aaKnown RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 KIAA2013Q8IYS2 634 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 FRMD1Q8N878 549 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 FSIP1Q8NA03 581 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 SPC24Q8NBT2 197 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 FAM46DQ8NEK8 389 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 LINS1Q8NG48 757 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ZCCHC10Q8TBK6 192 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 MDM1Q8TC05 714 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ASB11Q8WXH4 323 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 KTI12Q96EK9 354 aaPredicted RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 ZNF764Q96H86 408 aaPredicted RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 PIGSQ96S52 555 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 TINAGL1Q9GZM7 467 aaPredicted RBP5.89□□□□□ -1.47
USP47-204ENST00000525078 ADAMTS10Q9H324 1103 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 FAM83DQ9H4H8 585 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 TRPV4Q9HBA0 871 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 SLC35C2Q9NQQ7 365 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 SLAMF8Q9P0V8 285 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 MKL2Q9ULH7 1088 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 MAFFQ9ULX9 164 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 SUFUQ9UMX1 484 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 ABCC9O60706 1549 aa5.89□□□□□ -1.47
USP47-204ENST00000525078 TRIM64CA6NLI5 447 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 CHL1O00533 1208 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 HNRNPCL1O60812 293 aaKnown RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 TULP3O75386 442 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 SLC43A1O75387 559 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 RPP40O75818 363 aaKnown RBP5.88□□□□□ -1.47
USP47-204ENST00000525078 METTL18O95568 372 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 GGPS1O95749 300 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 DBHP09172 617 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 WEE2P0C1S8 567 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 ZGLP1P0C6A0 271 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 CYP2C9P11712 490 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 GYPEP15421 78 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 SAT1P21673 171 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 YY1P25490 414 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 TM4SF1P30408 202 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 GRK5P34947 590 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 RAD23AP54725 363 aa5.88□□□□□ -1.47
USP47-204ENST00000525078 CHRNEQ04844 493 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms