RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 M0QYT0 321 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 LIASO43766 372 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 CREB1P16220 341 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
PTPRK-216ENST00000524481 BDNFP23560 247 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-216ENST00000524481 CD302Q8IX05 232 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
PTPRK-216ENST00000524481 CNPY3Q9BT09 278 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 MYO7AQ13402 2215 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 PFKMP08237 780 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 NCAM1P13591 858 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 SULT1E1P49888 294 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 TKTL1P51854 596 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 RNF180Q86T96 592 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 MSL3Q8N5Y2 521 aaKnown RBP12.29□□□□□ -0.44
PTPRK-216ENST00000524481 GDAP1Q8TB36 358 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 SLC7A14Q8TBB6 771 aa12.29□□□□□ -0.44
PTPRK-216ENST00000524481 MYO18AQ92614 2054 aaKnown RBP12.29□□□□□ -0.44
PTPRK-216ENST00000524481 MGEA5O60502 916 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 AVILO75366 819 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TRUB2O95900 331 aaKnown RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 KRT15P19012 456 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 ITIH2P19823 946 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 AMPD1P23109 780 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TAP1Q03518 808 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 PPP2R5DQ14738 602 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TMED2Q15363 201 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 HFE2Q6ZVN8 426 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 SRRM1Q8IYB3 904 aaKnown RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 GOLGA8RI6L899 631 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 GPR182O15218 404 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 ITGB1P05556 798 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 APRTP07741 180 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 SRGAP2BP0DMP2 458 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 CYBAP13498 195 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 CA8P35219 290 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 CTCFP49711 727 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 ZNF143P52747 638 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 ENPEPQ07075 957 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 NOGQ13253 232 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 HOOK3Q86VS8 718 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 MAP7D3Q8IWC1 876 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 CCDC110Q8TBZ0 833 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 USP6NLQ92738 828 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 KLF6Q99612 283 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TRAIPQ9BWF2 469 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TMBIM4Q9HC24 238 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 RAB6BQ9NRW1 208 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 NAALADL1Q9UQQ1 740 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 MFHAS1Q9Y4C4 1052 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 MAD1L1Q9Y6D9 718 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 PLXNB2O15031 1838 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 HAS3O00219 553 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 RIPK2O43353 540 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 VIMP08670 466 aaKnown RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TIGD5Q53EQ6 642 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 RNF187Q5TA31 235 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-216ENST00000524481 SYPL2Q5VXT5 272 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 CASC4Q6P4E1 433 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 CPLX4Q7Z7G2 160 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 TBCBQ99426 244 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 STARD7Q9NQZ5 370 aa12.28□□□□□ -0.44
PTPRK-216ENST00000524481 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 C2CD4BA6NLJ0 364 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 PQBP1O60828 265 aaKnown RBP12.27□□□□□ -0.44
PTPRK-216ENST00000524481 SPAG7O75391 227 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 GABBR2O75899 941 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 MOCS2O96007 188 aaPredicted RBP12.27□□□□□ -0.44
PTPRK-216ENST00000524481 TNFRSF8P28908 595 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 SSTR1P30872 391 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 ADAM17P78536 824 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 BST2Q10589 180 aaKnown RBP12.27□□□□□ -0.44
PTPRK-216ENST00000524481 SLMAPQ14BN4 828 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 CTAGE3PQ8IX95 158 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 PALM2Q8IXS6 379 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 FUKQ8N0W3 1084 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 FAM193BQ96PV7 902 aaPredicted RBP12.27□□□□□ -0.44
PTPRK-216ENST00000524481 TMEM209Q96SK2 561 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 ULBP1Q9BZM6 244 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 RSAD1Q9HA92 442 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 CNTN3Q9P232 1028 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 TRIM17Q9Y577 477 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 SNX10Q9Y5X0 201 aa12.27□□□□□ -0.44
PTPRK-216ENST00000524481 CCDC78A2IDD5 438 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 PIRO00625 290 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 ZBED1O96006 694 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 MAGEA4P43358 317 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 BCAT1P54687 386 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 CCL23P55773 120 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms