RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 SLC45A1Q9Y2W3 748 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 FAM32AQ9Y421 112 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 UBXN8O00124 270 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PLEKP08567 350 aaPredicted RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 HNRNPH3P31942 346 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 CYP2C19P33261 490 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 MRPS35P82673 323 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 CYP24A1Q07973 514 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 C2orf54Q08AI8 447 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CSTF3Q12996 717 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 STX3Q13277 289 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 SLC12A1Q13621 1099 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 DHX34Q14147 1143 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 ANGPT1Q15389 498 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 TIGD5Q53EQ6 642 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ZNF484Q5JVG2 852 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CELF3Q5SZQ8 465 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 ACBD5Q5T8D3 534 aaPredicted RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 WLSQ5T9L3 541 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 MEI1Q5TIA1 1274 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ARMC6Q6NXE6 501 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 WDR59Q6PJI9 974 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 C16orf89Q6UX73 402 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CAPN12Q6ZSI9 719 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PCYOX1LQ8NBM8 494 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ZFP42Q96MM3 310 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 NLRP4Q96MN2 994 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ANKRD27Q96NW4 1050 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CBWD1Q9BRT8 395 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PRRG3Q9BZD7 231 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ST6GALNAC4Q9H4F1 302 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 RUBCNLQ9H714 662 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 VTA1Q9NP79 307 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 BFARQ9NZS9 450 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ARHGAP20Q9P2F6 1191 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 TRIM10Q9UDY6 481 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 NCKAP1Q9Y2A7 1128 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 AP4S1Q9Y587 144 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 MAFBQ9Y5Q3 323 aaPredicted RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 ZMYM2Q9UBW7 1377 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 KANSL1LA0AUZ9 987 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 TMEM150BA6NC51 233 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 GMNCA6NCL1 334 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 F8VZ95 297 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 MAGEB2O15479 319 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PJA2O43164 708 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 TGFB1I1O43294 461 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 NCK2O43639 380 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 FTCDO95954 541 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 INHAP05111 366 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 YBX3P16989 372 aaKnown RBP eCLIP2.69□□□□□ -1.986e-7■□□□□ 9.3
PCM1-222ENST00000524226 OR1G1P47890 313 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 SERPINB9P50453 376 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 EPHB3P54753 998 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PSMC1P62191 440 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 PPP2R2AP63151 447 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 KCNA1Q09470 495 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 HIC1Q14526 733 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 STAT4Q14765 748 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 ZNF568Q3ZCX4 644 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CEP78Q5JTW2 689 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 GJC2Q5T442 439 aaPredicted RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 KCTD16Q68DU8 428 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 GJB7Q6PEY0 223 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CHRDL2Q6WN34 429 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 DCLK2Q8N568 766 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 APPL2Q8NEU8 664 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 BAP1Q92560 729 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PLEKHA8Q96JA3 519 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 VPS50Q96JG6 964 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 CLMNQ96JQ2 1002 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 FRMD8Q9BZ67 464 aaPredicted RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 CCDC90BQ9GZT6 254 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PORCNQ9H237 461 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 FANCEQ9HB96 536 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 SYTL2Q9HCH5 934 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 PAPOLBQ9NRJ5 636 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 UTP6Q9NYH9 597 aaKnown RBP2.69□□□□□ -1.98
PCM1-222ENST00000524226 PTPN22Q9Y2R2 807 aa2.69□□□□□ -1.98
PCM1-222ENST00000524226 SAC3D1A6NKF1 404 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 C5orf58C9J3I9 102 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 RASA4BC9J798 803 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 BIRC5O15392 142 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 RASA4O43374 803 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 LZTS3O60299 673 aaPredicted RBP2.68□□□□□ -1.98
PCM1-222ENST00000524226 ZC3H11AO75152 810 aaKnown RBP eCLIP2.68□□□□□ -1.98
PCM1-222ENST00000524226 RTN2O75298 545 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 MTRF1O75570 445 aaKnown RBP2.68□□□□□ -1.98
PCM1-222ENST00000524226 KLHL2O95198 593 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 IL18RAPO95256 599 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 LCA5LO95447 670 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 MRPS25P82663 173 aaKnown RBP2.68□□□□□ -1.98
PCM1-222ENST00000524226 ENPEPQ07075 957 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 STILQ15468 1287 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 COLEC12Q5KU26 742 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 OR6B2Q6IFH4 312 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 IKBIPQ70UQ0 350 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 PLPPR4Q7Z2D5 763 aa2.68□□□□□ -1.98
PCM1-222ENST00000524226 TRAPPC11Q7Z392 1133 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms