RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OVCA2Q8WZ82 227 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 JAKMIP2Q96AA8 810 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 CCSER2Q9H7U1 834 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 TMEM8AQ9HCN3 771 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 IL37Q9NZH6 218 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 USP18Q9UMW8 372 aa21.93■■□□□ 1.1
SDCBP-209ENST00000522243 CYP17A1P05093 508 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 CNR2P34972 360 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 OPRD1P41143 372 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 PRCPP42785 496 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 NUCB2P80303 420 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 SPEM2Q0P670 501 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 GAB4Q2WGN9 574 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 EDRF1Q3B7T1 1238 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 FBXO43Q4G163 708 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 HECTD3Q5T447 861 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 LAIR1Q6GTX8 287 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 CEP68Q76N32 757 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 ADGRG2Q8IZP9 1017 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 HHIPQ96QV1 700 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 PARD6AQ9NPB6 346 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 MYOFQ9NZM1 2061 aa21.92■■□□□ 1.1
SDCBP-209ENST00000522243 ANTXRLA6NF34 631 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 FAM200BP0CF97 657 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 TGM1P22735 817 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 HOXA6P31267 233 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 PGFP49763 221 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 INCA1Q0VD86 236 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 DHCR24Q15392 516 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 KRT39Q6A163 491 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.91■■□□□ 1.1
SDCBP-209ENST00000522243 CCDC150Q8NCX0 1101 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 ENGASEQ8NFI3 743 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 WHAMMQ8TF30 809 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 SEMA4DQ92854 862 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 CYFIP2Q96F07 1278 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 NT5C1AQ9BXI3 368 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 NIF3L1Q9GZT8 377 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 CYP3A43Q9HB55 503 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 CSNK1G1Q9HCP0 422 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 RMND1Q9NWS8 449 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 COMMD8Q9NX08 183 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 GVINP1Q7Z2Y8 2422 aa21.91■■□□□ 1.1
SDCBP-209ENST00000522243 SLC9A3R1O14745 358 aaPredicted RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 CETN3O15182 167 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 EPB41P11171 864 aaKnown RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 SEC13P55735 322 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 ENPEPQ07075 957 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 RSPO4Q2I0M5 234 aaPredicted RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 ZNF394Q53GI3 561 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 ZNF658Q5TYW1 1059 aaPredicted RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 CLEC20AQ6ZU45 233 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 GPRIN1Q7Z2K8 1008 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 DDX42Q86XP3 938 aaKnown RBP eCLIP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 GPR161Q8N6U8 529 aaKnown RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 WBP2Q969T9 261 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 ZFRQ96KR1 1074 aaKnown RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 HNRNPABQ99729 332 aaKnown RBP21.9■■□□□ 1.1
SDCBP-209ENST00000522243 PCDHA5Q9Y5H7 936 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 GPR179Q6PRD1 2367 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 EML5Q05BV3 1969 aa21.9■■□□□ 1.1
SDCBP-209ENST00000522243 FAM92AA1XBS5 289 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 CILPO75339 1184 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 ZDHHC11BP0C7U3 371 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 IRF1P10914 325 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 TRIM21P19474 475 aaKnown RBP21.89■■□□□ 1.09
SDCBP-209ENST00000522243 SLC6A11P48066 632 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 MXI1P50539 228 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 SNX30Q5VWJ9 437 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 RHBDF2Q6PJF5 856 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 NACA2Q9H009 215 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 FBXO44Q9H4M3 255 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 SH3BP1Q9Y3L3 701 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 RALGAPA1Q6GYQ0 2036 aa21.89■■□□□ 1.09
SDCBP-209ENST00000522243 TRIM49BA6NDI0 452 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 HHLA1C9JL84 531 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 RETP07949 1114 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 GTF2H1P32780 548 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 PMS1P54277 932 aaKnown RBP21.88■■□□□ 1.09
SDCBP-209ENST00000522243 DMC1Q14565 340 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 C2orf27AQ580R0 203 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 TCERG1LQ5VWI1 586 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 ANKRD40Q6AI12 368 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 ISM2Q6H9L7 571 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 C12orf40Q86WS4 652 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 FAM160A2Q8N612 972 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-209ENST00000522243 SMARCE1Q969G3 411 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 GSDMAQ96QA5 445 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 TSG101Q99816 390 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 TBC1D14Q9P2M4 693 aa21.88■■□□□ 1.09
SDCBP-209ENST00000522243 K7EQS6 105 aa21.87■■□□□ 1.09
SDCBP-209ENST00000522243 SMC2O95347 1197 aa21.87■■□□□ 1.09
SDCBP-209ENST00000522243 CCDC192P0DO97 292 aa21.87■■□□□ 1.09
SDCBP-209ENST00000522243 ACO1P21399 889 aaKnown RBP21.87■■□□□ 1.09
SDCBP-209ENST00000522243 TUBP50607 506 aa21.87■■□□□ 1.09
SDCBP-209ENST00000522243 PUM1Q14671 1186 aaKnown RBP eCLIP21.87■■□□□ 1.09
SDCBP-209ENST00000522243 DCAF17Q5H9S7 520 aaPredicted RBP21.87■■□□□ 1.09
SDCBP-209ENST00000522243 LY6G5CQ5SRR4 150 aa21.87■■□□□ 1.09
SDCBP-209ENST00000522243 PPP1R26Q5T8A7 1209 aaPredicted RBP21.87■■□□□ 1.09
SDCBP-209ENST00000522243 SYT13Q7L8C5 426 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms