RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 TKTL1P51854 596 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 HTR4Q13639 388 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 GPRIN1Q7Z2K8 1008 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 TMEM150AQ86TG1 271 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 TADA2BQ86TJ2 420 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 SLC47A2Q86VL8 602 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 SCML4Q8N228 414 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 MSANTD4Q8NCY6 345 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
HDAC2-211ENST00000521233 SCAMP5Q8TAC9 235 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 UBA3Q8TBC4 463 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
HDAC2-211ENST00000521233 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 SLC35F5Q8WV83 523 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 ASB16Q96NS5 453 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 CDK5RAP1Q96SZ6 601 aaKnown RBP13.17□□□□□ -0.3
HDAC2-211ENST00000521233 LHX5Q9H2C1 402 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 TRPV4Q9HBA0 871 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.32e-9■□□□□ 8.9
HDAC2-211ENST00000521233 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
HDAC2-211ENST00000521233 TCF20Q9UGU0 1960 aaKnown RBP13.17□□□□□ -0.3
HDAC2-211ENST00000521233 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ANHXE9PGG2 379 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ECI2O75521 394 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ZBED1O96006 694 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 CKMP06732 381 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 TPM1P09493 284 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 GPD2P43304 727 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 PLCB2Q00722 1185 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 TRIM72Q6ZMU5 477 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 CMTM8Q8IZV2 173 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 TMEM35BQ8NCS4 154 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
HDAC2-211ENST00000521233 TRIM62Q9BVG3 475 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 TTYH3Q9C0H2 523 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ZFP14Q9HCL3 533 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 TRPC7Q9HCX4 862 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 ACP6Q9NPH0 428 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 CNGB3Q9NQW8 809 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 GMIPQ9P107 970 aa13.16□□□□□ -0.3
HDAC2-211ENST00000521233 DENND4CQ5VZ89 1909 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 DPYSL4O14531 572 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 CALCAP01258 141 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 ZDHHC11BP0C7U3 371 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 CDR2Q01850 454 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 PDCLQ13371 301 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
HDAC2-211ENST00000521233 PTPN21Q16825 1174 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 SPECC1LQ69YQ0 1117 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 TXNDC8Q6A555 127 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 NOP9Q86U38 636 aaKnown RBP13.15□□□□□ -0.3
HDAC2-211ENST00000521233 DDX42Q86XP3 938 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC2-211ENST00000521233 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 MAB21L3Q8N8X9 362 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 DEPDC1BQ8WUY9 529 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 IRGQQ8WZA9 623 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 BAP1Q92560 729 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 GOLGA1Q92805 767 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 NECAB3Q96P71 396 aaPredicted RBP13.15□□□□□ -0.3
HDAC2-211ENST00000521233 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 MIS12Q9H081 205 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 RBSNQ9H1K0 784 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 KCNK12Q9HB15 430 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 ST7Q9NRC1 585 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 LIMD1Q9UGP4 676 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 NOCTQ9UK39 431 aaKnown RBP13.15□□□□□ -0.3
HDAC2-211ENST00000521233 SORCS3Q9UPU3 1222 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 NUMBLQ9Y6R0 609 aa13.15□□□□□ -0.3
HDAC2-211ENST00000521233 LRRC53A6NM62 1247 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 TULP2O00295 520 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
HDAC2-211ENST00000521233 OLFM2O95897 454 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 ABL1P00519 1130 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
HDAC2-211ENST00000521233 RALAP11233 206 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 FCARP24071 287 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
HDAC2-211ENST00000521233 RPL34P49207 117 aaKnown RBP13.14□□□□□ -0.31
HDAC2-211ENST00000521233 RGS7P49802 495 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 ARID5AQ03989 594 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 TDGQ13569 410 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 ASIC2Q16515 512 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 SFMBT2Q5VUG0 894 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 TAF3Q5VWG9 929 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 PM20D1Q6GTS8 502 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
HDAC2-211ENST00000521233 PMF1Q6P1K2 205 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms