RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
PVT1-209ENST00000520913 WDR5BQ86VZ2 330 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
PVT1-209ENST00000520913 CRYBG2Q8N1P7 616 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 SLC2A14Q8TDB8 520 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 TAS1R2Q8TE23 839 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 ACDQ96AP0 544 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 CSNK1G1Q9HCP0 422 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 FAM49BQ9NUQ9 324 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 SMPD4Q9NXE4 827 aa11.38□□□□□ -0.59
PVT1-209ENST00000520913 HOOK1Q9UJC3 728 aaKnown RBP11.38□□□□□ -0.59
PVT1-209ENST00000520913 GPR179Q6PRD1 2367 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 CCDC163A0A0D9SF12 145 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 FAM92AA1XBS5 289 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 CETN3O15182 167 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 SLC16A3O15427 465 aaKnown RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 SMC2O95347 1197 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 CYP17A1P05093 508 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 GTF2H1P32780 548 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 GALK1P51570 392 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 SIM2Q14190 667 aaPredicted RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 HECTD3Q5T447 861 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 ZNF658Q5TYW1 1059 aaPredicted RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 SNX30Q5VWJ9 437 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 NAIF1Q69YI7 327 aaPredicted RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 KRT39Q6A163 491 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 HEATR6Q6AI08 1181 aaKnown RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 ERMP1Q7Z2K6 904 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 FILIP1Q7Z7B0 1213 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 ZMIZ2Q8NF64 920 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 RPLP0P6Q8NHW5 317 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 CCDC26Q8TAB7 109 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 SCAMP5Q8TAC9 235 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 TSG101Q99816 390 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 SMOQ99835 787 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 NT5C1AQ9BXI3 368 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 GTPBP4Q9BZE4 634 aaKnown RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 FBXO44Q9H4M3 255 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 APOBEC3GQ9HC16 384 aaKnown RBP11.37□□□□□ -0.59
PVT1-209ENST00000520913 PNPLA8Q9NP80 782 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■■■ 68.3
PVT1-209ENST00000520913 IL37Q9NZH6 218 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 GMIPQ9P107 970 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 CFAP97Q9P2B7 532 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 SLC8A2Q9UPR5 921 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 THADAQ6YHU6 1953 aa11.37□□□□□ -0.59
PVT1-209ENST00000520913 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 COCHO43405 550 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 LRP3O75074 770 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 CILPO75339 1184 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 ADH1CP00326 375 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 ZDHHC11BP0C7U3 371 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 CD58P19256 250 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 ADORA2BP29275 332 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 OPRD1P41143 372 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 EIF2DP41214 584 aaKnown RBP11.36□□□□□ -0.59
PVT1-209ENST00000520913 PRCPP42785 496 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 MAP3K7CLP57077 242 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 FOXK2Q01167 660 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 LPAL2Q16609 132 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 CLEC20AQ6ZU45 233 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 CEP68Q76N32 757 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 TTC39CQ8N584 583 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 CAMKK1Q8N5S9 505 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 FBXL13Q8NEE6 735 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 SMARCE1Q969G3 411 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 FAXDC2Q96IV6 333 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 ZFRQ96KR1 1074 aaKnown RBP11.36□□□□□ -0.59
PVT1-209ENST00000520913 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 TWNKQ96RR1 684 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 HNRNPABQ99729 332 aaKnown RBP11.36□□□□□ -0.59
PVT1-209ENST00000520913 LINC00597Q9H2U6 94 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 FAM124BQ9H5Z6 455 aaPredicted RBP11.36□□□□□ -0.59
PVT1-209ENST00000520913 CCSER2Q9H7U1 834 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 FBRSL1Q9HCM7 1045 aaKnown RBP11.36□□□□□ -0.59
PVT1-209ENST00000520913 TLR8Q9NR97 1041 aaKnown RBP11.36□□□□□ -0.59
PVT1-209ENST00000520913 TBC1D14Q9P2M4 693 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 USP18Q9UMW8 372 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 SH3BP1Q9Y3L3 701 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 PCDHA5Q9Y5H7 936 aa11.36□□□□□ -0.59
PVT1-209ENST00000520913 TLR5O60602 858 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 BEST1O76090 585 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 RETP07949 1114 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 ADH5P11766 374 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
PVT1-209ENST00000520913 LMNB2Q03252 620 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 LRRC63Q05C16 580 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 SRSF5Q13243 272 aaKnown RBP11.35□□□□□ -0.59
PVT1-209ENST00000520913 STIM1Q13586 685 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 DHCR24Q15392 516 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 GAB4Q2WGN9 574 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 DCAF17Q5H9S7 520 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms