RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 TRPC3Q13507 836 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 LCE1DQ5T752 114 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF662Q6ZS27 426 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 PDCL2Q8N4E4 241 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 GSTCDQ8NEC7 633 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 DIS3LQ8TF46 1054 aaKnown RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 TAF4BQ92750 862 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 C18orf25Q96B23 403 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 TOX2Q96NM4 488 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 APOL6Q9BWW8 343 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 BCO2Q9BYV7 579 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 CCDC86Q9H6F5 360 aaKnown RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 C1orf112Q9NSG2 853 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 RNF19AQ9NV58 838 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 CRIM1Q9NZV1 1036 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 TUBGCP4Q9UGJ1 667 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 PARP2Q9UGN5 583 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 GPN3Q9UHW5 284 aaPredicted RBP8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 PAXBP1Q9Y5B6 917 aa8.39□□□□□ -1.07
CTHRC1-203ENST00000520337 A0A0U1RQF3 1178 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ANO9A1A5B4 782 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 DDX3XO00571 662 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 PTGESO14684 152 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 PPEF2O14830 753 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 CCP110O43303 1012 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ZSCAN12O43309 604 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 CTIFO43310 598 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 AKR1B10O60218 316 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 PQBP1O60828 265 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 NBNO60934 754 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ITGA4P13612 1032 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ZSCAN20P17040 1043 aaPredicted RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 TBXAS1P24557 533 aaPredicted RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ANXA13P27216 316 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 POLR2BP30876 1174 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ATICP31939 592 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF132P52740 706 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 FAM189BP81408 668 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 RBP5P82980 135 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ID3Q02535 119 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 TLE2Q04725 743 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 BFSP2Q13515 415 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 SLC18A3Q16572 532 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF699Q32M78 642 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 TDRD12Q587J7 1177 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 GLRA4Q5JXX5 417 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 AGMOQ6ZNB7 445 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 LRRC8DQ7L1W4 858 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 NOP9Q86U38 636 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 SLC47A2Q86VL8 602 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 FMNL3Q8IVF7 1028 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 LNX1Q8TBB1 728 aaPredicted RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 SLC20A1Q8WUM9 679 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 LINC01599Q8WXQ3 324 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 LPPQ93052 612 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 HPDLQ96IR7 371 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 FAXDC2Q96IV6 333 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 PPP1R10Q96QC0 940 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ADAM2Q99965 735 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ACP6Q9NPH0 428 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 C1GALT1Q9NS00 363 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 RGS18Q9NS28 235 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 MIOSQ9NXC5 875 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ADAMTS1Q9UHI8 967 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 NOCTQ9UK39 431 aaKnown RBP8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 TFR2Q9UP52 801 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 AGAP1Q9UPQ3 857 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
CTHRC1-203ENST00000520337 ARL5CA6NH57 179 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 C9IYK1 514 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PIRO00625 290 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PJA2O43164 708 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 CALCAP01258 141 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 KRT19P08727 400 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 WEE2P0C1S8 567 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 CCDC172P0C7W6 258 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 KRT5P13647 590 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 CYP11B1P15538 503 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 CYP3A5P20815 502 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 USP8P40818 1118 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 MAGEA1P43355 309 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 RAB27AP51159 221 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 VAV2P52735 878 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 KRT83P78385 493 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 BMS1Q14692 1282 aaKnown RBP8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 SPA17Q15506 151 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 NAB2Q15742 525 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 TCTN1Q2MV58 587 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 TRIM60Q495X7 471 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 C9orf57Q5W0N0 161 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 OGFOD3Q6PK18 319 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 ECHDC2Q86YB7 292 aa8.37□□□□□ -1.07
CTHRC1-203ENST00000520337 PALB2Q86YC2 1186 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms