RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 TCEAL1Q15170 157 aa17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 RHOT2Q8IXI1 618 aa17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 RNF10Q8N5U6 811 aaKnown RBP17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 TRIM11Q96F44 468 aa17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 C11orf84Q9BUA3 381 aaPredicted RBP17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 SELENOOQ9BVL4 669 aa17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 FNIP2Q9P278 1114 aa17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 AFF4Q9UHB7 1163 aaKnown RBP17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 RWDD3Q9Y3V2 267 aa17.88■□□□□ 0.45
TSNARE1-205ENST00000520166 MTA2O94776 668 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 RB1P06400 928 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 ATF2P15336 505 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 MAGEA11P43364 429 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 PITX1P78337 314 aaPredicted RBP17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 ADGRD2Q7Z7M1 963 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 SPPL2BQ8TCT7 592 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 C8orf48Q96LL4 319 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 UBXN6Q9BZV1 441 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 UVRAGQ9P2Y5 699 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 STRIP2Q9ULQ0 834 aa17.87■□□□□ 0.45
TSNARE1-205ENST00000520166 CARNS1A5YM72 827 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 FYNP06241 537 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 DNA2P51530 1060 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 DAOAP59103 153 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 MRPS5P82675 430 aaKnown RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 DCUN1D2Q6PH85 259 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 LILRA6Q6PI73 481 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 VSTM1Q6UX27 236 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 DAAM2Q86T65 1068 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 RBM23Q86U06 439 aaKnown RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 SIX6OS1Q8N1H7 587 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 ARFGAP1Q8N6T3 406 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 OXCT2Q9BYC2 517 aaPredicted RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 SLC28A3Q9HAS3 691 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 CALCOCO1Q9P1Z2 691 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 ALG6Q9Y672 507 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 USP3Q9Y6I4 520 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 PLXNA3P51805 1871 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 ZBED1O96006 694 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 ATP1A1P05023 1023 aaKnown RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 KLRC2P26717 231 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 ACADSBP45954 432 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 GSCP56915 257 aaPredicted RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 C15orf59Q2T9L4 293 aaPredicted RBP17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 SYPL2Q5VXT5 272 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 TXLNBQ8N3L3 684 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 RXFP2Q8WXD0 754 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 CFAP57Q96MR6 1250 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 OSER1Q9NX31 292 aa17.86■□□□□ 0.45
TSNARE1-205ENST00000520166 COMTP21964 271 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 HADHBP55084 474 aaKnown RBP17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 RAB30Q15771 203 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 PPP1R2P3Q6NXS1 205 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 SLFN11Q7Z7L1 901 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 SCD5Q86SK9 330 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 MSANTD4Q8NCY6 345 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 EDEM1Q92611 657 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 TIFAQ96CG3 184 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 PSMB7Q99436 277 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 NMUR1Q9HB89 426 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 MRPL47Q9HD33 250 aaKnown RBP17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 CYLDQ9NQC7 956 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 WDR35Q9P2L0 1181 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 NUDT5Q9UKK9 219 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 NAALADL1Q9UQQ1 740 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 USTQ9Y2C2 406 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 IRAK3Q9Y616 596 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 SCINQ9Y6U3 715 aa17.85■□□□□ 0.45
TSNARE1-205ENST00000520166 C2CD4BA6NLJ0 364 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 TRIM66O15016 1216 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 LPXNO60711 386 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 GTF2F1P35269 517 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■■□ 21.1
TSNARE1-205ENST00000520166 MARCKSL1P49006 195 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 ATXN1P54253 815 aaKnown RBP17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 MYO9BQ13459 2157 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 CCDC14Q49A88 953 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 TPGS2Q68CL5 300 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 PM20D1Q6GTS8 502 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 NT5DC3Q86UY8 548 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 NUP93Q8N1F7 819 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 C2orf15Q8WU43 125 aaKnown RBP17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 FAM149B1Q96BN6 582 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 MAGED2Q9UNF1 606 aaPredicted RBP17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 YIPF1Q9Y548 306 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 PATJQ8NI35 1801 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 SLC38A8A6NNN8 435 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 MYO1FO00160 1098 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 PDGFRAP16234 1089 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 EPCAMP16422 314 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 TAS2R40P59535 323 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 ATP11AP98196 1134 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 UBE3AQ05086 875 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 TWF1Q12792 350 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 SMARCB1Q12824 385 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 TXNRD3NBQ6F5E7 133 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 SLC26A9Q7LBE3 791 aa17.84■□□□□ 0.45
TSNARE1-205ENST00000520166 DEFB106AQ8N104 65 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms