RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SOX17Q9H6I2 414 aaPredicted RBP5.34□□□□□ -1.55
SDC2-204ENST00000519914 APOBEC3GQ9HC16 384 aaKnown RBP5.34□□□□□ -1.55
SDC2-204ENST00000519914 ZFYVE28Q9HCC9 887 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 MRPL47Q9HD33 250 aaKnown RBP5.34□□□□□ -1.55
SDC2-204ENST00000519914 TOPORSQ9NS56 1045 aaPredicted RBP5.34□□□□□ -1.55
SDC2-204ENST00000519914 RAD18Q9NS91 495 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 EURLQ9NYK6 297 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 FBXO40Q9UH90 709 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 DDX20Q9UHI6 824 aaKnown RBP5.34□□□□□ -1.55
SDC2-204ENST00000519914 HACL1Q9UJ83 578 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 ANAPC7Q9UJX3 599 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 AGO2Q9UKV8 859 aaKnown RBP5.34□□□□□ -1.55
SDC2-204ENST00000519914 EFR3BQ9Y2G0 817 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 ATP8A1Q9Y2Q0 1164 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 AFG3L2Q9Y4W6 797 aa5.34□□□□□ -1.55
SDC2-204ENST00000519914 SBF1O95248 1867 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 RALGAPA2Q2PPJ7 1873 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 A0A096LPE4 126 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 A0A1W2PPZ6 126 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 DCDC2CA8MYV0 355 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 E7EVH7 732 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ABLIM1O14639 778 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 RGS16O15492 202 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 CLDN3O15551 220 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 THAP12O43422 761 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ADCY3O60266 1144 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 FZD6O60353 706 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 MAFO75444 373 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 RASSF9O75901 435 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 KIAA0754O94854 1291 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 TTC4O95801 387 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ASS1P00966 412 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 OAS1P00973 400 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 CALB1P05937 261 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ADH5P11766 374 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 PROZP22891 400 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 MMP8P22894 467 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 RRM1P23921 792 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 KLRC2P26717 231 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ATP5DP30049 168 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 COPB2P35606 906 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 NSFP46459 744 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 GMPSP49915 693 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 LIG4P49917 911 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 EFNA5P52803 228 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 SEC24CP53992 1094 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 SLC18A1P54219 525 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 NLRP11P59045 1033 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 SP2Q02086 613 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 LMNB2Q03252 620 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 TAP1Q03518 808 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ACTN3Q08043 901 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 PCDH1Q08174 1060 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 IFFO1Q0D2I5 559 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 STRN3Q13033 797 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CALCOCO2Q13137 446 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 MAMLD1Q13495 774 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 STXBP2Q15833 593 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 TAZQ16635 292 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ZNF423Q2M1K9 1284 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 OGFOD2Q6N063 350 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 TAOK1Q7L7X3 1001 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 TDRPQ86YL5 185 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CPNE8Q86YQ8 564 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 WDR49Q8IV35 697 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 RHOT1Q8IXI2 618 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CCDC105Q8IYK2 499 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ANKRD35Q8N283 1001 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 FLCNQ8NFG4 579 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.33□□□□□ -1.568e-7■■□□□ 13.1
SDC2-204ENST00000519914 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 FNIP1Q8TF40 1166 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CCDC127Q96BQ5 260 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CHMP6Q96FZ7 201 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 RBM41Q96IZ5 413 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 SEC16BQ96JE7 1060 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 FAM167AQ96KS9 214 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 FNBP1Q96RU3 617 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 PCYT2Q99447 389 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 FAM213AQ9BRX8 229 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 CDC42EP4Q9H3Q1 356 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 SUDS3Q9H7L9 328 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 PPCSQ9HAB8 311 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 ZNF302Q9NR11 478 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 PICK1Q9NRD5 415 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 HOMER2Q9NSB8 354 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 RGS17Q9UGC6 210 aaPredicted RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 DRG1Q9Y295 367 aaKnown RBP5.33□□□□□ -1.56
SDC2-204ENST00000519914 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.33□□□□□ -1.56
SDC2-204ENST00000519914 PLXNA1Q9UIW2 1896 aa5.33□□□□□ -1.56
SDC2-204ENST00000519914 PTPRJQ12913 1337 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 ZNF541Q9H0D2 1346 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 GSTTP1A0A1W2PQM5 241 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 TMEM191CA6NGB0 347 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 TMEM110-MUSTN1A8MSY1 372 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 RASGRF2O14827 1237 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 B4GALT4O60513 344 aa5.32□□□□□ -1.56
SDC2-204ENST00000519914 EIF4EBP3O60516 100 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms