RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 PTPN9P43378 593 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 SLC25A11Q02978 314 aaKnown RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 ADCY1Q08828 1119 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 NFE2Q16621 373 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 CDO1Q16878 200 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 C15orf59Q2T9L4 293 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 GLE1Q53GS7 698 aaKnown RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 KLHL7Q8IXQ5 586 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 RCOR2Q8IZ40 523 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 KHSRPQ92945 711 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 CFAP57Q96MR6 1250 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 NCAPGQ9BPX3 1015 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 LRRC1Q9BTT6 524 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 PARD6BQ9BYG5 372 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 UBE2OQ9C0C9 1292 aaKnown RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 CWH43Q9H720 699 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 ZWILCHQ9H900 591 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 PNPLA8Q9NP80 782 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 CNGB3Q9NQW8 809 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 KLHL11Q9NVR0 708 aa12.97□□□□□ -0.33
SPIDR-209ENST00000519141 ARGLU1Q9NWB6 273 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-209ENST00000519141 HHLA1C9JL84 531 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 GLI1P08151 1106 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 MIPP30301 263 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 ATP11AP98196 1134 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 PPIGQ13427 754 aaKnown RBP eCLIP12.96□□□□□ -0.336e-7■■■■□ 19.7
SPIDR-209ENST00000519141 MRPL58Q14197 206 aaKnown RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 RAB41Q5JT25 222 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 GPRIN1Q7Z2K8 1008 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 TDHQ8IZJ6 230 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 ZNF689Q96CS4 500 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 FUBP3Q96I24 572 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 B3GALT6Q96L58 329 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 PNKPQ96T60 521 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 TTPALQ9BTX7 342 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 OXCT2Q9BYC2 517 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 DDX47Q9H0S4 455 aaKnown RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 SLITRK6Q9H5Y7 841 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 ABI2Q9NYB9 513 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPIDR-209ENST00000519141 USP18Q9UMW8 372 aa12.96□□□□□ -0.33
SPIDR-209ENST00000519141 MYO16Q9Y6X6 1858 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 LRRD1A4D1F6 860 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 PI4K2BG5E9Z4 385 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 FSCN2O14926 492 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 PRPSAP2O60256 369 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 RALAP11233 206 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 MCM3P25205 808 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 MATKP42679 507 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 NDUFV1P49821 464 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 RABGGTBP53611 331 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 DAOAP59103 153 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 COPS2P61201 443 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 YWHAZP63104 245 aaKnown RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 BTG3Q14201 252 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 ATP13A4Q4VNC1 1196 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 TXNRD3NBQ6F5E7 133 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 ANKS3Q6ZW76 656 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 TMCO2Q7Z6W1 182 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 RUBCNQ92622 972 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 ACSF2Q96CM8 615 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 ZNF558Q96NG5 402 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 SLITRK1Q96PX8 696 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 LBHD1Q9BQE6 289 aaPredicted RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 DDX23Q9BUQ8 820 aaKnown RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 OSBPL8Q9BZF1 889 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.34
SPIDR-209ENST00000519141 PCSK1NQ9UHG2 260 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 PCDHB5Q9Y5E4 795 aa12.96□□□□□ -0.34
SPIDR-209ENST00000519141 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 PRUNE2Q8WUY3 3088 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 CARNS1A5YM72 827 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 SOX1O00570 391 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-209ENST00000519141 PHF2O75151 1096 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
SPIDR-209ENST00000519141 ZBED1O96006 694 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 CPB1P15086 417 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 H2AFXP16104 143 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-209ENST00000519141 LAG3P18627 525 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 CYP2F1P24903 491 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 IL1R2P27930 398 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 GRIK1P39086 918 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 FPGSQ05932 587 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 USP41Q3LFD5 358 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms