RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CELF5Q8N6W0 485 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 OR7D4Q8NG98 312 aa5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 ATXN2LQ8WWM7 1075 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 WASF1Q92558 559 aa5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 TRIM63Q969Q1 353 aa5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 FOXP1Q9H334 677 aaPredicted RBP5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 RBM28Q9NW13 759 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 VPS54Q9P1Q0 977 aa5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 FBXO2Q9UK22 296 aaPredicted RBP5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 NOL7Q9UMY1 257 aaKnown RBP5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 ATP6V0A2Q9Y487 856 aa5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 PCDHA1Q9Y5I3 950 aa5.35□□□□□ -1.55
CTNNA1-212ENST00000518919 CCDC88AQ3V6T2 1871 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CDK5RAP2Q96SN8 1893 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ZNF646O15015 1829 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 C10orf71Q711Q0 1435 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ADAMTS3O15072 1205 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ADCY6O43306 1168 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 PPP6R2O75170 966 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CYP7B1O75881 506 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ALDH1A2O94788 518 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 KNG1P01042 644 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 HMGCRP04035 888 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 AMY1AP04745 511 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 LDHCP07864 332 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 GLI1P08151 1106 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SLC3A2P08195 630 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 FTH1P19P0C7X4 201 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CALM1P0DP23 149 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CALM2P0DP24 149 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CALM3P0DP25 149 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ATF2P15336 505 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 VEGFAP15692 232 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CMA1P23946 247 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SARSP49591 514 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 PLCD1P51178 756 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 RENBPP51606 427 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SESN2P58004 480 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ICA1Q05084 483 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SNAPC2Q13487 334 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 BLMHQ13867 455 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 GRM4Q14833 912 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 STARD3Q14849 445 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 PPP2R5BQ15173 497 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 ELF2Q15723 593 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 KCNMB1Q16558 191 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 FLYWCH1Q4VC44 716 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 KHDC1LQ5JSQ8 128 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SESTD1Q86VW0 696 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 PLA2G4DQ86XP0 818 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 DHX40Q8IX18 779 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SP8Q8IXZ3 490 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 TEX11Q8IYF3 940 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 RTKN2Q8IZC4 609 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 TBC1D22AQ8WUA7 517 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 C11orf84Q9BUA3 381 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 MXD3Q9BW11 206 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 IL17RBQ9NRM6 502 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 TMEM140Q9NV12 185 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 PIH1D1Q9NWS0 290 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 SIRT5Q9NXA8 310 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 GPRC5DQ9NZD1 345 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 AJAP1Q9UKB5 411 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 PCDHA6Q9UN73 950 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 MAGED2Q9UNF1 606 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 CEP83Q9Y592 693 aa5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.34□□□□□ -1.55
CTNNA1-212ENST00000518919 FOCADQ5VW36 1801 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 TSPY2A6NKD2 308 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 APOL1O14791 398 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 ZNF500O60304 480 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 ZNF202O95125 648 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 BAG3O95817 575 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 CD1AP06126 327 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 PTMAP06454 111 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 EN2P19622 333 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 DDCP20711 480 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 KRT2P35908 639 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 ETV4P43268 484 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 CCT5P48643 541 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 NT5C2P49902 561 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 ZNF75DP51815 510 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 SUMO3P55854 103 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 TFAP4Q01664 338 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 FMO1Q01740 532 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 DPCR1Q3MIW9 517 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 CCDC38Q502W7 563 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 CCDC70Q6NSX1 233 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 HIBCHQ6NVY1 386 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 TLDC1Q6P9B6 456 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 TRMT10BQ6PF06 316 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 SARM1Q6SZW1 724 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 SASS6Q6UVJ0 657 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 SYDE1Q6ZW31 735 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 LDHDQ86WU2 507 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 ZSWIM9Q86XI8 627 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 ABI1Q8IZP0 508 aa5.33□□□□□ -1.56
CTNNA1-212ENST00000518919 MYCT1Q8N699 235 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms