RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
PCM1-203ENST00000517545 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
PCM1-203ENST00000517545 DNAL1Q4LDG9 190 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 PDSS2Q86YH6 399 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 SLC9A2Q9UBY0 812 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ENTPD3O75355 529 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 CST3P01034 146 aaPredicted RBP12.88□□□□□ -0.35
PCM1-203ENST00000517545 RBP3P10745 1247 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 KDELR1P24390 212 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 AQP4P55087 323 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 IRX4P78413 519 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ISLR2Q6UXK2 745 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 RFX6Q8HWS3 928 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 EMC1Q8N766 993 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 HIPK4Q8NE63 616 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 FAM172AQ8WUF8 416 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 TFAP2BQ92481 460 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 OPTNQ96CV9 577 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ARHGAP28Q9P2N2 729 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 ADAMTS6Q9UKP5 1117 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 SCN9AQ15858 1988 aa12.88□□□□□ -0.35
PCM1-203ENST00000517545 PDE5AO76074 875 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 STK10O94804 968 aaKnown RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 PEX2P28328 305 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 CAP2P40123 477 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 JAK3P52333 1124 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 ZNF132P52740 706 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 DLG1Q12959 904 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 LSAMPQ13449 338 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 NCOA4Q13772 614 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 PGM5Q15124 567 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 DHDDSQ86SQ9 333 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 SATL1Q86VE3 508 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 SLC26A11Q86WA9 606 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 NUDCD3Q8IVD9 361 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 ST13P4Q8IZP2 240 aaPredicted RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 CCDC124Q96CT7 223 aaKnown RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 HAPLN3Q96S86 360 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 MMP19Q99542 508 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 SHCBP1LQ9BZQ2 653 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 POLR3FQ9H1D9 316 aaPredicted RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 VCX3AQ9NNX9 186 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 SMYD2Q9NRG4 433 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 HBS1LQ9Y450 684 aaKnown RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 TTLL3Q9Y4R7 772 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 EPHB1P54762 984 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 ASPHQ12797 758 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 DGKZQ13574 1117 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 FAXCQ5TGI0 409 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 TTC39BQ5VTQ0 682 aaPredicted RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 SLC26A7Q8TE54 656 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 SIRPGQ9P1W8 387 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 A0A0B4J269 797 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 RFPL1O75677 317 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 PTGER2P43116 358 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 HNRNPDQ14103 355 aaKnown RBP12.87□□□□□ -0.35
PCM1-203ENST00000517545 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 HSPH1Q92598 858 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 PLAC1Q9HBJ0 212 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 DNAJB4Q9UDY4 337 aa12.87□□□□□ -0.35
PCM1-203ENST00000517545 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 STBD1O95210 358 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 TBXAS1P24557 533 aaPredicted RBP12.86□□□□□ -0.35
PCM1-203ENST00000517545 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
PCM1-203ENST00000517545 USP4Q13107 963 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 PABPC1LQ4VXU2 614 aaKnown RBP12.86□□□□□ -0.35
PCM1-203ENST00000517545 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 CRLF3Q8IUI8 442 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 NIPA2Q8N8Q9 360 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 TMEM35BQ8NCS4 154 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
PCM1-203ENST00000517545 HERC5Q9UII4 1024 aaKnown RBP12.86□□□□□ -0.35
PCM1-203ENST00000517545 SOX13Q9UN79 622 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 STAM2O75886 525 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 EDN1P05305 212 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 HIC1Q14526 733 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 EFHC1Q5JVL4 640 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 SWSAP1Q6NVH7 229 aa12.86□□□□□ -0.35
PCM1-203ENST00000517545 KYAT3Q6YP21 454 aaKnown RBP12.86□□□□□ -0.35
PCM1-203ENST00000517545 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms