RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 PPP1R26Q5T8A7 1209 aaPredicted RBP26.04■■□□□ 1.76
PVT1-204ENST00000517525 DDX42Q86XP3 938 aaKnown RBP eCLIP26.04■■□□□ 1.76
PVT1-204ENST00000517525 SYNPOQ8N3V7 929 aa26.04■■□□□ 1.76
PVT1-204ENST00000517525 HEXIM2Q96MH2 286 aaKnown RBP26.04■■□□□ 1.76
PVT1-204ENST00000517525 EBF3Q9H4W6 596 aa26.04■■□□□ 1.76
PVT1-204ENST00000517525 FAM86C1Q9NVL1 165 aa26.04■■□□□ 1.76
PVT1-204ENST00000517525 SPATA6Q9NWH7 488 aaPredicted RBP26.04■■□□□ 1.76
PVT1-204ENST00000517525 DUS2Q9NX74 493 aaKnown RBP26.04■■□□□ 1.76
PVT1-204ENST00000517525 OTOL1A6NHN0 477 aaPredicted RBP26.03■■□□□ 1.76
PVT1-204ENST00000517525 LEFTY2O00292 366 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 SP9P0CG40 484 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 EML3Q32P44 896 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 ATP2A3Q93084 1043 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 MED15Q96RN5 788 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 SEMA4AQ9H3S1 761 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 PRMT8Q9NR22 394 aaPredicted RBP26.03■■□□□ 1.76
PVT1-204ENST00000517525 CHORDC1Q9UHD1 332 aaPredicted RBP26.03■■□□□ 1.76
PVT1-204ENST00000517525 KIAA1257Q9ULG3 409 aa26.03■■□□□ 1.76
PVT1-204ENST00000517525 TRDMT1O14717 391 aaKnown RBP26.02■■□□□ 1.76
PVT1-204ENST00000517525 LAMTOR5O43504 91 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 CCDC192P0DO97 292 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 ARSAP15289 507 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 KIF11P52732 1056 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 KCNH2Q12809 1159 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 CCINQ13939 588 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 ZNF394Q53GI3 561 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 TRIM68Q6AZZ1 485 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 ALYREFQ86V81 257 aaKnown RBP26.02■■□□□ 1.76
PVT1-204ENST00000517525 CPA6Q8N4T0 437 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 ZNF276Q8N554 614 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 NELL1Q92832 810 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 CHFRQ96EP1 664 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 NT5C1BQ96P26 610 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 ECT2Q9H8V3 914 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 LMBRD1Q9NUN5 540 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 GMIPQ9P107 970 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 CPQQ9Y646 472 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 USP3Q9Y6I4 520 aa26.02■■□□□ 1.76
PVT1-204ENST00000517525 IFNAR2P48551 515 aa26.01■■□□□ 1.75
PVT1-204ENST00000517525 IFRD2Q12894 506 aaPredicted RBP26.01■■□□□ 1.75
PVT1-204ENST00000517525 MTAPQ13126 283 aa26.01■■□□□ 1.75
PVT1-204ENST00000517525 TMEM196Q5HYL7 178 aa26.01■■□□□ 1.75
PVT1-204ENST00000517525 ANKRD52Q8NB46 1076 aa26.01■■□□□ 1.75
PVT1-204ENST00000517525 TLR8Q9NR97 1041 aaKnown RBP26.01■■□□□ 1.75
PVT1-204ENST00000517525 SLC9A3R1O14745 358 aaPredicted RBP26■■□□□ 1.75
PVT1-204ENST00000517525 COCHO43405 550 aa26■■□□□ 1.75
PVT1-204ENST00000517525 ABL1P00519 1130 aa26■■□□□ 1.75
PVT1-204ENST00000517525 GPRIN1Q7Z2K8 1008 aa26■■□□□ 1.75
PVT1-204ENST00000517525 CCDC186Q7Z3E2 898 aa26■■□□□ 1.75
PVT1-204ENST00000517525 EHBP1Q8NDI1 1231 aa26■■□□□ 1.75
PVT1-204ENST00000517525 TTC8Q8TAM2 541 aa26■■□□□ 1.75
PVT1-204ENST00000517525 EXOC4Q96A65 974 aa26■■□□□ 1.75
PVT1-204ENST00000517525 ZFRQ96KR1 1074 aaKnown RBP26■■□□□ 1.75
PVT1-204ENST00000517525 CYLDQ9NQC7 956 aa26■■□□□ 1.75
PVT1-204ENST00000517525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26■■□□□ 1.75
PVT1-204ENST00000517525 WNT6Q9Y6F9 365 aa26■■□□□ 1.75
PVT1-204ENST00000517525 PAPSS2O95340 614 aaPredicted RBP25.99■■□□□ 1.75
PVT1-204ENST00000517525 AFPP02771 609 aaKnown RBP25.99■■□□□ 1.75
PVT1-204ENST00000517525 ACO1P21399 889 aaKnown RBP25.99■■□□□ 1.75
PVT1-204ENST00000517525 GJA4P35212 333 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 PSEN1P49768 467 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 GCNT1Q02742 428 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 NR1H3Q13133 447 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 SMYD5Q6GMV2 418 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 KLHDC10Q6PID8 442 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 SPEM1Q8N4L4 309 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 FAM126AQ9BYI3 521 aaPredicted RBP25.99■■□□□ 1.75
PVT1-204ENST00000517525 LINC00597Q9H2U6 94 aa25.99■■□□□ 1.75
PVT1-204ENST00000517525 E2F8A0AVK6 867 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 NFATC1O95644 943 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 PAEPP09466 180 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 MBL2P11226 248 aaPredicted RBP25.98■■□□□ 1.75
PVT1-204ENST00000517525 PON2Q15165 354 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 CT47A1Q5JQC4 288 aaPredicted RBP25.98■■□□□ 1.75
PVT1-204ENST00000517525 RAB41Q5JT25 222 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 JAKMIP2Q96AA8 810 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 NUP62CLQ9H1M0 184 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 CCSER2Q9H7U1 834 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 PATJQ8NI35 1801 aa25.98■■□□□ 1.75
PVT1-204ENST00000517525 TLR5O60602 858 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 VDRP11473 427 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 ERCC5P28715 1186 aaPredicted RBP25.97■■□□□ 1.75
PVT1-204ENST00000517525 PGFP49763 221 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 CCR3P51677 355 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 LRMPQ12912 555 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 GAS6Q14393 721 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 SGO2Q562F6 1265 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 ZC3H14Q6PJT7 736 aaKnown RBP25.97■■□□□ 1.75
PVT1-204ENST00000517525 IRF2BP1Q8IU81 584 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 ADGRG2Q8IZP9 1017 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 OTUB2Q96DC9 234 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 GBP4Q96PP9 640 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 CLIC5Q9NZA1 410 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 TBC1D14Q9P2M4 693 aa25.97■■□□□ 1.75
PVT1-204ENST00000517525 ZFHX2Q9C0A1 2572 aaPredicted RBP25.97■■□□□ 1.75
PVT1-204ENST00000517525 TDGF1P13385 188 aa25.96■■□□□ 1.75
PVT1-204ENST00000517525 SLC8A3P57103 927 aa25.96■■□□□ 1.75
PVT1-204ENST00000517525 GRSF1Q12849 480 aaKnown RBP eCLIP25.96■■□□□ 1.75
PVT1-204ENST00000517525 FSTL4Q6MZW2 842 aa25.96■■□□□ 1.75
PVT1-204ENST00000517525 TTC30AQ86WT1 665 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms