RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 FAHP16930 419 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 PRKCHP24723 683 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 KRT2P35908 639 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 MAGEA10P43363 369 aaPredicted RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 PREPP48147 710 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 CPT1AP50416 773 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 RRP1P56182 461 aaKnown RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 CTXN1P60606 82 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 GNAI1P63096 354 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 POU6F2P78424 691 aaPredicted RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ARHGEF7Q14155 803 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SMU1Q2TAY7 513 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 C2orf76Q3KRA6 126 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 RAB41Q5JT25 222 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ERMARDQ5T6L9 678 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 MEX3CQ5U5Q3 659 aaKnown RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 IRGCQ6NXR0 463 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 OLFM4Q6UX06 510 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM83HQ6ZRV2 1179 aaPredicted RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ILDR2Q71H61 639 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 PLPPR4Q7Z2D5 763 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCDC186Q7Z3E2 898 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 FBXO11Q86XK2 927 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 TUSC5Q8IXB3 177 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 DTWD1Q8N5C7 304 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZBTB44Q8NCP5 570 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 WDR48Q8TAF3 677 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZCCHC10Q8TBK6 192 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 HMGB4Q8WW32 186 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SEPT1Q8WYJ6 367 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SLC22A18Q96BI1 424 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 VPS39Q96JC1 886 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 HEXIM2Q96MH2 286 aaKnown RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 CMTM3Q96MX0 182 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 RAB3IPQ96QF0 476 aaPredicted RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ABHD1Q96SE0 405 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SOX7Q9BT81 388 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 PHF7Q9BWX1 381 aaPredicted RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 TEX12Q9BXU0 123 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 FUT8Q9BYC5 575 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 TAOK3Q9H2K8 898 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 KAT14Q9H8E8 782 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 PLEKHA2Q9HB19 425 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZBTB26Q9HCK0 441 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 PFDN4Q9NQP4 134 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 ARHGEF3Q9NR81 526 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SNX15Q9NRS6 342 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 C1GALT1Q9NS00 363 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SNTG1Q9NSN8 517 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 KCTD5Q9NXV2 234 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 SELENONQ9NZV5 590 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 KCMF1Q9P0J7 381 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 FBLN5Q9UBX5 448 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 LIMA1Q9UHB6 759 aaKnown RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 CNTN6Q9UQ52 1028 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 RUVBL1Q9Y265 456 aaKnown RBP4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 KCNE2Q9Y6J6 123 aa4.24□□□□□ -1.73
RNU4-60P-201ENST00000517239 KDM3AQ9Y4C1 1321 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 hCG_1809904A0A1W2PP81 198 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 A0A1W2PPE2 198 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 A0A1W2PR48 441 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 A0A1W2PR64 198 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TCRBV5S2A0A599 114 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM90A20PA6NIJ5 464 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LIPT2A6NK58 231 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 GNAT3A8MTJ3 354 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 PES1O00541 588 aaKnown RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 WDR46O15213 610 aaKnown RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TP73O15350 636 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ASAP2O43150 1006 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TGFB1I1O43294 461 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZBTB43O43298 467 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 DYRK3O43781 588 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 PRPSAP2O60256 369 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TULP3O75386 442 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 GPR32O75388 356 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LY86O95711 162 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 AVPP01185 164 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 VIPP01282 170 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 PROCP04070 461 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 GJB1P08034 283 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 EPXP11678 715 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TFEBP19484 476 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 PTGS1P23219 599 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TACR1P25103 407 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 APEX1P27695 318 aaKnown RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 MCM7P33993 719 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 HSPA4P34932 840 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 RFC1P35251 1148 aaPredicted RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 MSX2P35548 267 aaPredicted RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SREBF1P36956 1147 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SLC12A3P55017 1021 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 CDH15P55291 814 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LRRC74AQ0VAA2 488 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 NFATC3Q12968 1075 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SMAD4Q13485 552 aaKnown RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 IRF3Q14653 427 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 CRYMQ14894 314 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 NFIXQ14938 502 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TRIM60Q495X7 471 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms