RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 SEC23BQ15437 767 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 HLFQ16534 295 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GNPTABQ3T906 1256 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FAM47AQ5JRC9 791 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RRP12Q5JTH9 1297 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 DACT2Q5SW24 774 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLC35F1Q5T1Q4 408 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KPRPQ5T749 579 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RSBN1Q5VWQ0 802 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SLFN12LQ6IEE8 588 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZCCHC8Q6NZY4 707 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF613Q6PF04 617 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EP400NLQ6ZTU2 488 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PTRH1Q86Y79 214 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GLYCTKQ8IVS8 523 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FSTL5Q8N475 847 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MAB21L3Q8N8X9 362 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PCSK9Q8NBP7 692 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMEM145Q8NBT3 493 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RP9Q8TA86 221 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FAM216AQ8WUB2 273 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNRF4Q8WWF5 429 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF799Q96GE5 643 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ADGRG7Q96K78 797 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 THAP7Q9BT49 309 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PHF20Q9BVI0 1012 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PARLQ9H300 379 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TUT1Q9H6E5 874 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PHAXQ9H814 394 aaKnown RBP-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EVA1AQ9H8M9 152 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PRDM16Q9HAZ2 1276 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 KCNH7Q9NS40 1196 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZFP57Q9NU63 452 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMEM160Q9NX00 188 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CTTNBP2NLQ9P2B4 639 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FZD10Q9ULW2 581 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 B3GNT3Q9Y2A9 372 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LOXL2Q9Y4K0 774 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PTGDR2Q9Y5Y4 395 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PTCH1Q13635 1447 aa-0.5□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TRBV5-3A0A0A0MS03 114 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 A0A1B0GVT2 93 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 A0A1W2PPC1 479 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 COL6A6A6NMZ7 2263 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PMS2P5A8MQ11 134 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 E7ENX8 843 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 F6X3S4 739 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 F8W810 466 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 HDAC3O15379 428 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 RGS14O43566 566 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 STRNO43815 780 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 OPHN1O60890 802 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GCATO75600 419 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SUN1O94901 812 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PLAUP00749 431 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GASTP01350 101 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NAT2P11245 290 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FCER1AP12319 257 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TSHRP16473 764 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF17P17021 662 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 GBP2P32456 591 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NPTX2P47972 431 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ALDH5A1P51649 535 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF133P52736 654 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF143P52747 638 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LINC01547P58512 204 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LINC00315P59091 139 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NOMO3P69849 1222 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TAP2Q03519 686 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CD69Q07108 199 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FUT7Q11130 342 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TUBB3Q13509 450 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PWP1Q13610 501 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NOMO1Q15155 1222 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TM4SF20Q53R12 229 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PRR30Q53SZ7 412 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 UMODL1Q5DID0 1318 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 NOMO2Q5JPE7 1267 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PITRM1Q5JRX3 1037 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PRAMEF14Q5SWL7 426 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CATSPEREQ5SY80 951 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MEI1Q5TIA1 1274 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ZNF530Q6P9A1 599 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MTHFD1LQ6UB35 978 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 FAM57BQ71RH2 274 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MB21D2Q8IYB1 491 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 Q8N377 158 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CCDC82Q8N4S0 544 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TCP11L2Q8N4U5 519 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 EFHBQ8N7U6 833 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CDYL2Q8N8U2 506 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 LSM14AQ8ND56 463 aaKnown RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 C7orf57Q8NEG2 295 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 ABHD11Q8NFV4 315 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 CMASQ8NFW8 434 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 PUM2Q8TB72 1066 aaKnown RBP eCLIP-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 MDM1Q8TC05 714 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SECTM1Q8WVN6 248 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 TMED6Q8WW62 240 aa-0.51□□□□□ -2.49
RNU6-1238P-201ENST00000517215 SORCS1Q8WY21 1168 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms