RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 CES2O00748 559 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 SPRY2O43597 315 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 FGAP02671 866 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 MT-ND5P03915 603 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 CYP2D6P10635 497 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 PRKAR1BP31321 381 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 CPT1AP50416 773 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 RENBPP51606 427 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 METTL25Q8N6Q8 603 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 WDYHV1Q96HA8 205 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 MSLNLQ96KJ4 702 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 MMS19Q96T76 1030 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 VN1R3Q9BXE9 311 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 QTRT1Q9BXR0 403 aaKnown RBP6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 DDX21Q9NR30 783 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 TBC1D23Q9NUY8 699 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 FAM50BQ9Y247 325 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 PAXBP1Q9Y5B6 917 aa6.3□□□□□ -1.4
SCARNA1-201ENST00000517138 TCRBV5S1A1TA0A578 114 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 PRKCBP05771 671 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 DLDP09622 509 aaKnown RBP6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 PIK3CBP42338 1070 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 TIRAPP58753 221 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 TUBA4AP68366 448 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 SLC10A2Q12908 348 aaPredicted RBP6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 TBC1D25Q3MII6 688 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 RRAGBQ5VZM2 374 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 PLAG1Q6DJT9 500 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 BCDIN3DQ7Z5W3 292 aaKnown RBP6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 C11orf44Q8N8P7 122 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 PHKBQ93100 1093 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 RSPRY1Q96DX4 576 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 DAZAP1Q96EP5 407 aaKnown RBP6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 SNX22Q96L94 193 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 FLRT1Q9NZU1 646 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 ASAP1Q9ULH1 1129 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 USP22Q9UPT9 525 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 SNX13Q9Y5W8 968 aa6.29□□□□□ -1.4
SCARNA1-201ENST00000517138 WDR91A4D1P6 747 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 PQBP1O60828 265 aaKnown RBP6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 PARP1P09874 1014 aaKnown RBP6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 TPH1P17752 444 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 EPHA3P29320 983 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 PGDP52209 483 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 LMAN2Q12907 356 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 SUPT20HL1Q3ZLR7 823 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 AWAT1Q58HT5 328 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 KLHDC7AQ5VTJ3 777 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 SIRT6Q8N6T7 355 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 SNX18Q96RF0 628 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 BTBD1Q9H0C5 482 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 DHX36Q9H2U1 1008 aaKnown RBP6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 PDGFCQ9NRA1 345 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 GJB4Q9NTQ9 266 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 AMFRQ9UKV5 643 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 RIMKLBQ9ULI2 386 aa6.28□□□□□ -1.4
SCARNA1-201ENST00000517138 A0A087WZ62 844 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 EXOC5O00471 708 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 ADAMTS3O15072 1205 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 KPNA5O15131 536 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 A1BGP04217 495 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 SLC5A1P13866 664 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 IL1R2P27930 398 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 DIO1P49895 249 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 GATMP50440 423 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 DEUP1Q05D60 604 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 FHL3Q13643 280 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 MANEALQ5VSG8 457 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 USP49Q70CQ1 688 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 LIX1LQ8IVB5 337 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 YAF2Q8IY57 180 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 C5orf34Q96MH7 638 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 ZNF778Q96MU6 729 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 RNF7Q9UBF6 113 aa6.27□□□□□ -1.41
SCARNA1-201ENST00000517138 H7C1Q1 480 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 PSMD9O00233 223 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 PRR35P0CG20 571 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 SFPQP23246 707 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 YY1P25490 414 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 EPHB2P29323 1055 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 MCM5P33992 734 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 SRSF7Q16629 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 PTCHD4Q6ZW05 846 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 YTHDF3Q7Z739 585 aaKnown RBP6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 KRT78Q8N1N4 520 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 ASB2Q96Q27 587 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 BRIP1Q9BX63 1249 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 NUP62CLQ9H1M0 184 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 ZNF212Q9UDV6 495 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 VPS51Q9UID3 782 aa6.26□□□□□ -1.41
SCARNA1-201ENST00000517138 RHPN2P1A8MT19 583 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 APAF1O14727 1248 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 MYCLP12524 364 aaPredicted RBP6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 APEHP13798 732 aaKnown RBP6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 CREB1P16220 341 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 LMO1P25800 156 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 COPB1P53618 953 aaKnown RBP6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 DAG1Q14118 895 aa6.25□□□□□ -1.41
SCARNA1-201ENST00000517138 ZNF626Q68DY1 528 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms