RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 PJA1Q8NG27 643 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 SH3TC2Q8TF17 1288 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ATG4AQ8WYN0 398 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 URB1-AS1Q96HZ7 61 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 TM2D2Q9BX73 214 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 DCLK3Q9C098 648 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 GLOD4Q9HC38 313 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRIM39Q9HCM9 518 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 CABP5Q9NP86 173 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 FZD3Q9NPG1 666 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 DPP7Q9UHL4 492 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 SSX2IPQ9Y2D8 614 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZHX2Q9Y6X8 837 aa0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 MYBBP1AQ9BQG0 1328 aaKnown RBP0.34□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRBV5-3A0A0A0MS03 114 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 MEIOCA2RUB1 952 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 TPP1O14773 563 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 APPP05067 770 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 PRSS2P07478 247 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 APEHP13798 732 aaKnown RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 ATF7P17544 494 aaPredicted RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 RFX5P48382 616 aaPredicted RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 NR0B1P51843 470 aaKnown RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 DRG2P55039 364 aaKnown RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 PMP22Q01453 160 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 KCNA1Q09470 495 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC14A1Q13336 389 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 KRT72Q14CN4 511 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 LARS2Q15031 903 aaKnown RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 KIF19Q2TAC6 998 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRIM61Q5EBN2 209 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 PLA2G4FQ68DD2 849 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 SWSAP1Q6NVH7 229 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 TMEM108Q6UXF1 575 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 FAM57BQ71RH2 274 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 TRAPPC11Q7Z392 1133 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 KRT77Q7Z794 578 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 POC1AQ8NBT0 407 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC44A5Q8NCS7 719 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 OR2I1PQ8NGU4 316 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 MAFAQ8NHW3 353 aaPredicted RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 TMED6Q8WW62 240 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 RSAD2Q8WXG1 361 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 JPH3Q8WXH2 748 aaPredicted RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 EAF2Q96CJ1 260 aaPredicted RBP0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 DUX5Q96PT3 197 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 PRR25Q96S07 402 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZIM2Q9NZV7 527 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 MED16Q9Y2X0 877 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 HIVEP2P31629 2446 aa0.33□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC22A23A1A5C7 686 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 OR6C75A6NL08 312 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 CBX4O00257 560 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 INPPL1O15357 1258 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 UGDHO60701 494 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 FGAP02671 866 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 KLKB1P03952 638 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 AMD1P17707 334 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 MLLT10P55197 1068 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 HSF1Q00613 529 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 XKR4Q5GH76 650 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 CC2D1BQ5T0F9 858 aaKnown RBP0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 TTLL5Q6EMB2 1281 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 NAPEPLDQ6IQ20 393 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 KRTAP5-10Q6L8G5 202 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 IGFL3Q6UXB1 125 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 DCDC5Q6ZRR9 648 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 C9orf139Q6ZV77 190 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF365Q70YC5 407 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 SND1Q7KZF4 910 aaKnown RBP eCLIP0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 KIF18BQ86Y91 864 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 SRBD1Q8N5C6 995 aaKnown RBP0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 AMER3Q8N944 861 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 ENGASEQ8NFI3 743 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 TSPEARQ8WU66 669 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 CHTF18Q8WVB6 975 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 LPAR1Q92633 364 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 ZNF501Q96CX3 271 aaPredicted RBP0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC46A1Q96NT5 459 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 ARID3AQ99856 593 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 SLC25A33Q9BSK2 321 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 RBM4Q9BWF3 364 aaKnown RBP0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 BCL11AQ9H165 835 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 MMP28Q9H239 520 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 ACBD3Q9H3P7 528 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 JKAMPQ9P055 326 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 COL20A1Q9P218 1284 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 SCOCQ9UIL1 159 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 GABRQQ9UN88 632 aa0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP0.32□□□□□ -2.36
RNU6-557P-201ENST00000516842 RRHO14718 337 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 KCNQ3O43525 872 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 RGS14O43566 566 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 KDM1AO60341 852 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 KIF20AO95235 890 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 ANOS1P23352 680 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 GATA2P23769 480 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 KCNJ4P48050 445 aa0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 GCLCP48506 637 aaPredicted RBP0.31□□□□□ -2.36
RNU6-557P-201ENST00000516842 GYS2P54840 703 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms