RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 LRRC38Q5VT99 294 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L6PQ6QN14 398 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 CLEC4GQ6UXB4 293 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 LPCAT2Q7L5N7 544 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 RHPN2Q8IUC4 686 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 TICAM1Q8IUC6 712 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 TRIML2Q8N7C3 387 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 NAT8LQ8N9F0 302 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 XXYLT1Q8NBI6 393 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 CXorf38Q8TB03 319 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 LENG9Q96B70 501 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 SNX27Q96L92 541 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 INO80BQ9C086 356 aaPredicted RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 VPS45Q9NRW7 570 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 APOBEC2Q9Y235 224 aaKnown RBP13.32□□□□□ -0.28
SMAD1-215ENST00000515385 SCINQ9Y6U3 715 aa13.32□□□□□ -0.28
SMAD1-215ENST00000515385 IGKV6D-41A0A0C4DH26 115 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 FBP2O00757 339 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 KRT37O76014 449 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 CAPNS1P04632 268 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 EEF2P13639 858 aaKnown RBP13.31□□□□□ -0.28
SMAD1-215ENST00000515385 CD58P19256 250 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 FUT4P22083 530 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 HMOX2P30519 316 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 NSFP46459 744 aaKnown RBP13.31□□□□□ -0.28
SMAD1-215ENST00000515385 GPC3P51654 580 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 ADGRE1Q14246 886 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 CHI3L2Q15782 390 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 RSPH3Q86UC2 560 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 TSPAN14Q8NG11 270 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 HELQQ8TDG4 1101 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 SLC2A11Q9BYW1 496 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 NYXQ9GZU5 481 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 APPL1Q9UKG1 709 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 COQ6Q9Y2Z9 468 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 COQ4Q9Y3A0 265 aa13.31□□□□□ -0.28
SMAD1-215ENST00000515385 DDX60LQ5H9U9 1706 aaKnown RBP13.31□□□□□ -0.28
SMAD1-215ENST00000515385 SGK1O00141 431 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 ADCY6O43306 1168 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 BAIAP3O94812 1187 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 PROCP04070 461 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 SNRPAP09012 282 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 ETS1P14921 441 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 STX3Q13277 289 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 C16orf72Q14CZ0 275 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 RALGPS1Q5JS13 557 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 FNBP1LQ5T0N5 605 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 ANGEL2Q5VTE6 544 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 IYDQ6PHW0 289 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 SLC26A11Q86WA9 606 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 LRRC47Q8N1G4 583 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 LZTR1Q8N653 840 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 ACCSQ96QU6 501 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 SERPINI1Q99574 410 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 PNPLA8Q9NP80 782 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 SCHIP1Q9P0W5 487 aaPredicted RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 FAM32AQ9Y421 112 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 COL4A1P02462 1669 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 FUOMA2VDF0 154 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 SOBPA7XYQ1 873 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 MSH4O15457 936 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 TBC1D12O60347 775 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 C8BP07358 591 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 RBP3P10745 1247 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 THRAP10827 490 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 L1CAMP32004 1257 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 SREBF1P36956 1147 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 CBLBQ13191 982 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 CCDC153Q494R4 210 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 TRIM72Q6ZMU5 477 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 CPT1BQ92523 772 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 PALMDQ9NP74 551 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 GINM1Q9NU53 330 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 IP6K2Q9UHH9 426 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 PRPF19Q9UMS4 504 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 ARHGAP26Q9UNA1 814 aa13.3□□□□□ -0.28
SMAD1-215ENST00000515385 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
SMAD1-215ENST00000515385 A0A0B4J269 797 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 ESRRBO95718 433 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 PSMC3P17980 439 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 TMED10P49755 219 aaKnown RBP13.29□□□□□ -0.28
SMAD1-215ENST00000515385 BCAP31P51572 246 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 TUBB3Q13509 450 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 TGFBIQ15582 683 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 INAQ16352 499 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 ZNF829Q3KNS6 432 aaPredicted RBP13.29□□□□□ -0.28
SMAD1-215ENST00000515385 DEFB107AQ8IZN7 70 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 RTFDC1Q9BY42 306 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms