RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 C15orf41Q9Y2V0 281 aa18.27■□□□□ 0.52
SNX2-213ENST00000514949 L3MBTL1Q9Y468 752 aa18.27■□□□□ 0.52
SNX2-213ENST00000514949 CFAP69A5D8W1 941 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 ZNF487B1APH4 448 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TGDSO95455 350 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 C1QAP02745 245 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 IL4RP24394 825 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 ELF1P32519 619 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 NEK3P51956 506 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 DARS2Q6PI48 645 aaKnown RBP18.26■□□□□ 0.51
SNX2-213ENST00000514949 MAP7D3Q8IWC1 876 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 FBXO16Q8IX29 292 aaPredicted RBP18.26■□□□□ 0.51
SNX2-213ENST00000514949 RXFP2Q8WXD0 754 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 ZNF668Q96K58 619 aaPredicted RBP18.26■□□□□ 0.51
SNX2-213ENST00000514949 RNPEPQ9H4A4 650 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNX2-213ENST00000514949 LNPEPQ9UIQ6 1025 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 PFKMP08237 780 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TXNP10599 105 aaKnown RBP18.26■□□□□ 0.51
SNX2-213ENST00000514949 PDGFRAP16234 1089 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 CYP3A5P20815 502 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TGM2P21980 687 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 RBP5P82980 135 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 ZNF200P98182 395 aaPredicted RBP18.26■□□□□ 0.51
SNX2-213ENST00000514949 MMRN1Q13201 1228 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TTLL4Q14679 1199 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 KCTD2Q14681 263 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TMEM132DQ14C87 1099 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 ACCSLQ4AC99 568 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 CCDC125Q86Z20 511 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 COPS5Q92905 334 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TBCBQ99426 244 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TLE6Q9H808 572 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 TXNRD2Q9NNW7 524 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 CHMP2BQ9UQN3 213 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 STK38LQ9Y2H1 464 aa18.26■□□□□ 0.51
SNX2-213ENST00000514949 A8MUI8 341 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 PRPSAP2O60256 369 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 MT-ND3P03897 115 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 TROVE2P10155 538 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNX2-213ENST00000514949 NDST1P52848 882 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 SEPT7Q16181 437 aaKnown RBP18.25■□□□□ 0.51
SNX2-213ENST00000514949 PLEKHG4Q58EX7 1191 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 NLRP9Q7RTR0 991 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 ERO1BQ86YB8 467 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 PLD5Q8N7P1 536 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 APOPT1Q96IL0 206 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 MMP19Q99542 508 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 MANSC1Q9H8J5 431 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 ZNF180Q9UJW8 692 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 KCNH4Q9UQ05 1017 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 MCM3APO60318 1980 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 BCLAF3A2AJT9 711 aaKnown RBP18.25■□□□□ 0.51
SNX2-213ENST00000514949 CTC1Q2NKJ3 1217 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 PKDCCQ504Y2 493 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 SH3PXD2AQ5TCZ1 1133 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 SLC9A4Q6AI14 798 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 NPNTQ6UXI9 565 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 FAM183BPQ6ZVS7 135 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 UBA3Q8TBC4 463 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 FAF2Q96CS3 445 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 NT5C1AQ9BXI3 368 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 ADAM33Q9BZ11 813 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 MROH8Q9H579 483 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 CXorf56Q9H5V9 222 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 KANSL3Q9P2N6 904 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 SLC17A7Q9P2U7 560 aa18.25■□□□□ 0.51
SNX2-213ENST00000514949 A0A087WZ62 844 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 KBTBD13C9JR72 458 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 E5RJQ4 531 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 TRDMT1O14717 391 aaKnown RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 INSRRP14616 1297 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 ARF4P18085 180 aaPredicted RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 TARSP26639 723 aaKnown RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 PTK7Q13308 1070 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 Q3C1V9 767 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 KBTBD12Q3ZCT8 623 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 CCDC14Q49A88 953 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 C4orf22Q6V702 233 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 TMEM130Q8N3G9 435 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 SH3TC2Q8TF17 1288 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 APBB2Q92870 758 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 ZBTB10Q96DT7 871 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 THOC1Q96FV9 657 aaKnown RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 ANKRD27Q96NW4 1050 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 FDXACB1Q9BRP7 624 aaPredicted RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 CNTN3Q9P232 1028 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 PPP1R1BQ9UD71 204 aaPredicted RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 HAO1Q9UJM8 370 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 TSPAN16Q9UKR8 245 aa18.24■□□□□ 0.51
SNX2-213ENST00000514949 DICER1Q9UPY3 1922 aaKnown RBP18.24■□□□□ 0.51
SNX2-213ENST00000514949 KLF11O14901 512 aa18.23■□□□□ 0.51
SNX2-213ENST00000514949 HGSO14964 777 aaPredicted RBP18.23■□□□□ 0.51
SNX2-213ENST00000514949 LPXNO60711 386 aa18.23■□□□□ 0.51
SNX2-213ENST00000514949 SETSIPP0DME0 302 aa18.23■□□□□ 0.51
SNX2-213ENST00000514949 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
SNX2-213ENST00000514949 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
SNX2-213ENST00000514949 TMEM110Q86TL2 294 aa18.23■□□□□ 0.51
SNX2-213ENST00000514949 ZC3H18Q86VM9 953 aaKnown RBP18.23■□□□□ 0.51
SNX2-213ENST00000514949 PQLC3Q8N755 202 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms