RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 NR1H3Q13133 447 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 FAM182AQ5T1J6 154 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 SYCP2LQ5T4T6 812 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 CGB2Q6NT52 195 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
SDHA-216ENST00000514027 PPIL6Q8IXY8 311 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 PYROXD1Q8WU10 500 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 IFT43Q96FT9 208 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
SDHA-216ENST00000514027 ADPGKQ9BRR6 497 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 ECT2Q9H8V3 914 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 RBPJLQ9UBG7 517 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 ZNF510Q9Y2H8 683 aa13.12□□□□□ -0.31
SDHA-216ENST00000514027 ALOX15BO15296 676 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 C22orf31O95567 290 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 VTNP04004 478 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 PDHA1P08559 390 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 TAC1P20366 129 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 CA4P22748 312 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 SSTR1P30872 391 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 NRLP54845 237 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 ARL4CP56559 192 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 EIF3EP60228 445 aaKnown RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 CDO1Q16878 200 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 FNBP1LQ5T0N5 605 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 PCGF5Q86SE9 256 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 UNC45BQ8IWX7 931 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 FAM71DQ8N9W8 422 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 CPT1BQ92523 772 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 IFT122Q9HBG6 1241 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.11□□□□□ -0.314e-6■■■■□ 20.4
SDHA-216ENST00000514027 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 KLHL14Q9P2G3 628 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 PSMC3IPQ9P2W1 217 aaPredicted RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 ATXN10Q9UBB4 475 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 LRRC42Q9Y546 428 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 A0A1W2PPM1 405 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 NDC80O14777 642 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 CILPO75339 1184 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 GRAP2O75791 330 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 INSRRP14616 1297 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 ATP6V1C1P21283 382 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 RPA3P35244 121 aaPredicted RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 RPL22P35268 128 aaKnown RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 SLC26A2P50443 739 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 GPX6P59796 221 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 ATP11AP98196 1134 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 MMRN1Q13201 1228 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 MTFR1Q15390 333 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 BBS9Q3SYG4 887 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 SH3PXD2AQ5TCZ1 1133 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 LCA5Q86VQ0 697 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 FBXO36Q8NEA4 188 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 FNIP1Q8TF40 1166 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 HPDLQ96IR7 371 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 IQCGQ9H095 443 aaKnown RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
SDHA-216ENST00000514027 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
SDHA-216ENST00000514027 CLUHO75153 1309 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 TCRBV7S3A2A0A539 114 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 MCF2LO15068 1137 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 WFS1O76024 890 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 PENKP01210 267 aaPredicted RBP13.1□□□□□ -0.31
SDHA-216ENST00000514027 KRT16P08779 473 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 ZNF286BP0CG31 522 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 PCK1P35558 622 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 GEMIN4P57678 1058 aaKnown RBP13.1□□□□□ -0.31
SDHA-216ENST00000514027 KLC1Q07866 573 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 NPNTQ6UXI9 565 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 ZC3H18Q86VM9 953 aaKnown RBP13.1□□□□□ -0.31
SDHA-216ENST00000514027 TDRPQ86YL5 185 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 SPATA18Q8TC71 538 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 MAK16Q9BXY0 300 aaKnown RBP13.1□□□□□ -0.31
SDHA-216ENST00000514027 PHACTR1Q9C0D0 580 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 PDZD7Q9H5P4 517 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
SDHA-216ENST00000514027 GALNT8Q9NY28 637 aa13.1□□□□□ -0.31
SDHA-216ENST00000514027 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
SDHA-216ENST00000514027 DNAJC25-GNG10A0A024R161 153 aa13.09□□□□□ -0.31
SDHA-216ENST00000514027 TMEM63AO94886 807 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms