RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 VSIG1Q86XK7 387 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ECHDC2Q86YB7 292 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 BBOF1Q8ND07 529 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 FAM76AQ8TAV0 307 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 KCTD13Q8WZ19 329 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 CENPIQ92674 756 aaPredicted RBP15.64■□□□□ 0.09
VCAN-211ENST00000513984 SYT15Q9BQS2 421 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 PAAF1Q9BRP4 392 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 CRTAC1Q9NQ79 661 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ZNF148Q9UQR1 794 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 FKTNO75072 461 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 LCP1P13796 627 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 PAX3P23760 479 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ADCY8P40145 1251 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 VEGFBP49765 207 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ITGA8P53708 1063 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 EIF3BP55884 814 aaKnown RBP15.64■□□□□ 0.09
VCAN-211ENST00000513984 TUSC3Q13454 348 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 ARHGEF6Q15052 776 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 MDH1BQ5I0G3 518 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 GSTA5Q7RTV2 222 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 RNF169Q8NCN4 708 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 OR2W6PQ8NHA6 318 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 TSPYL1Q9H0U9 437 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 TRPV6Q9H1D0 765 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 TMBIM4Q9HC24 238 aa15.64■□□□□ 0.09
VCAN-211ENST00000513984 NGRNQ9NPE2 291 aaKnown RBP15.64■□□□□ 0.09
VCAN-211ENST00000513984 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
VCAN-211ENST00000513984 ZNF638Q14966 1978 aaKnown RBP15.63■□□□□ 0.09
VCAN-211ENST00000513984 APOC4-APOC2K7ER74 178 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 CLDN5O00501 218 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 MDM4O15151 490 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 POMCP01189 267 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 APOC2P02655 101 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 CDH6P55285 790 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 HDAC4P56524 1084 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 OTUD4Q01804 1114 aaKnown RBP15.63■□□□□ 0.09
VCAN-211ENST00000513984 DPYSL3Q14195 570 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 PDK2Q15119 407 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 TIGD5Q53EQ6 642 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 EFHC1Q5JVL4 640 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 CLEC20AQ6ZU45 233 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 ACTL9Q8TC94 416 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 HAUS1Q96CS2 278 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 UROC1Q96N76 676 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 DDX23Q9BUQ8 820 aaKnown RBP15.63■□□□□ 0.09
VCAN-211ENST00000513984 CALN1Q9BXU9 219 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 STARD7Q9NQZ5 370 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 AAASQ9NRG9 546 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 RGS18Q9NS28 235 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 CDH9Q9ULB4 789 aa15.63■□□□□ 0.09
VCAN-211ENST00000513984 GOLGA6L10A6NI86 522 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 BEST1O76090 585 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 CYP11A1P05108 521 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 ODC1P11926 461 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 GRK4P32298 578 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 VPS41P49754 854 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 DYNLT1P63172 113 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 ADCY1Q08828 1119 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 MBTPS1Q14703 1052 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 CD300LGQ6UXG3 332 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 RFX6Q8HWS3 928 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 ATP6V1G3Q96LB4 118 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 SNRNP25Q9BV90 132 aaKnown RBP15.62■□□□□ 0.09
VCAN-211ENST00000513984 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.62■□□□□ 0.09
VCAN-211ENST00000513984 ANAPC5Q9UJX4 755 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 PHF24Q9UPV7 400 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
VCAN-211ENST00000513984 ZNF487B1APH4 448 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 HMGB1P1B2RPK0 211 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 C9IYK1 514 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 MYZAPP0CAP1 466 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 FAM200BP0CF97 657 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 PCSK1P29120 753 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 ADIGQ0VDE8 80 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 TFDP2Q14188 446 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 GLIPR1L2Q4G1C9 344 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 IZUMO3Q5VZ72 239 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 DENND2CQ68D51 928 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 HIBCHQ6NVY1 386 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 FAM35AQ86V20 835 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 MAP7D3Q8IWC1 876 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 GLIS1Q8NBF1 620 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 ZNF296Q8WUU4 475 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 MED10Q9BTT4 135 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 ADAM33Q9BZ11 813 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 SEMA4AQ9H3S1 761 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 PCDH9Q9HC56 1237 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 KRT82Q9NSB4 513 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.61■□□□□ 0.09
VCAN-211ENST00000513984 TIMM13Q9Y5L4 95 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 COL4A4P53420 1690 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 M0QZQ0 153 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 ARVCFO00192 962 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 DNALI1O14645 258 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 DAB1O75553 588 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 EOMESO95936 686 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 TFE3P19532 575 aaPredicted RBP15.61■□□□□ 0.09
VCAN-211ENST00000513984 CHKAP35790 457 aa15.61■□□□□ 0.09
VCAN-211ENST00000513984 MATKP42679 507 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms