RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PDCLQ13371 301 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 CAMK2BQ13554 666 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 STILQ15468 1287 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 C2CD6Q53TS8 623 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 FIGNQ5HY92 759 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 GPR158Q5T848 1215 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 SFMBT2Q5VUG0 894 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 DNAAF5Q86Y56 855 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 WDTC1Q8N5D0 677 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 TDRD5Q8NAT2 981 aaKnown RBP10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 OLIG1Q8TAK6 271 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC35F5Q8WV83 523 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 ATXN2LQ8WWM7 1075 aaKnown RBP10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 FGF13Q92913 245 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 PIWIL1Q96J94 861 aaKnown RBP10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 ZSWIM3Q96MP5 696 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 NECTIN4Q96NY8 510 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 GCNAQ96QF7 691 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 TTLL2Q9BWV7 592 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 NMUR1Q9HB89 426 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 LRRC4Q9HBW1 653 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 DAAM1Q9Y4D1 1078 aa10.33□□□□□ -0.76
TOPBP1-209ENST00000513818 A0A1W2PQH9 124 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 A0A1W2PQJ5 194 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 C2orf78A6NCI8 922 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 E5RJQ4 531 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 MDM4O15151 490 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 RTN3O95197 1032 aaPredicted RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 ADCY5O95622 1261 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 BMP1P13497 986 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 TKTL1P51854 596 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 KIF11P52732 1056 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 ADKP55263 362 aaKnown RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC8A3P57103 927 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 BPIFB4P59827 614 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 NOMO3P69849 1222 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 CDR2Q01850 454 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 ZP2Q05996 745 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 AAK1Q2M2I8 961 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 PTPN20Q4JDL3 420 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 TXNDC8Q6A555 127 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 CYP26C1Q6V0L0 522 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 BHLHA9Q7RTU4 235 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 IRF2BP2Q7Z5L9 587 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 PHLDB2Q86SQ0 1253 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 SIX6OS1Q8N1H7 587 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 MAB21L3Q8N8X9 362 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 SPC24Q8NBT2 197 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 TTC16Q8NEE8 873 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 TRMT2BQ96GJ1 504 aaKnown RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 MYRFLQ96LU7 910 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 CPXM1Q96SM3 734 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 PHF7Q9BWX1 381 aaPredicted RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 HAUS4Q9H6D7 363 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 OSER1Q9NX31 292 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 CHORDC1Q9UHD1 332 aaPredicted RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 NUDT5Q9UKK9 219 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 CDH7Q9ULB5 785 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 CAPN11Q9UMQ6 739 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 A0A0C4DFX4 3053 aa10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 NUP210Q8TEM1 1887 aaPredicted RBP10.32□□□□□ -0.76
TOPBP1-209ENST00000513818 HELZP42694 1942 aaKnown RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ZNF840PA6NDX5 716 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ZNF197O14709 1029 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SCAMP3O14828 347 aaKnown RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 MFAP3LO75121 409 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 PRAMEF12O95522 483 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ERBB2P04626 1255 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ASGR2P07307 311 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 CDC25CP30307 473 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ZBED6P86452 979 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 RAB41Q5JT25 222 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 HFE2Q6ZVN8 426 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ZNF571Q7Z3V5 609 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SCD5Q86SK9 330 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 LEMD2Q8NC56 503 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SLC30A5Q8TAD4 765 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 ZSCAN18Q8TBC5 510 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 RSAD2Q8WXG1 361 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 CPA5Q8WXQ8 436 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 MRPS31Q92665 395 aaKnown RBP10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 RSPRY1Q96DX4 576 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 MRFAP1L1Q96HT8 127 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 AGPAT1Q99943 283 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 KXD1Q9BQD3 176 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SYT11Q9BT88 431 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 SMOC2Q9H3U7 446 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 CCSER2Q9H7U1 834 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 GRPEL1Q9HAV7 217 aa10.31□□□□□ -0.76
TOPBP1-209ENST00000513818 PNPLA8Q9NP80 782 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms