RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 CD72P21854 359 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 ADORA2BP29275 332 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 RPL34P49207 117 aaKnown RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 TNK2Q07912 1038 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 CETN1Q12798 172 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 LRMPQ12912 555 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 CNGA2Q16280 664 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 CDKAL1Q5VV42 579 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 PM20D1Q6GTS8 502 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 KLHDC10Q6PID8 442 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 C1orf228Q6PIY5 440 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 TRIM65Q6PJ69 517 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 TXNDC11Q6PKC3 985 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 LCLAT1Q6UWP7 414 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 TPRG1Q6ZUI0 275 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 BHLHA9Q7RTU4 235 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 SCD5Q86SK9 330 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 RALGPS2Q86X27 583 aaPredicted RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 MAML2Q8IZL2 1156 aaPredicted RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 SH3RF2Q8TEC5 729 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 OSCP1Q8WVF1 389 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 FBXO32Q969P5 355 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 ZFYVE19Q96K21 471 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 INTS2Q9H0H0 1204 aaKnown RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 C8orf33Q9H7E9 229 aaPredicted RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 SIX2Q9NPC8 291 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 THG1LQ9NWX6 298 aaKnown RBP10.26□□□□□ -0.77
RNF4-221ENST00000513643 GTSE1Q9NYZ3 720 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 PIAS3Q9Y6X2 628 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 GPR179Q6PRD1 2367 aa10.26□□□□□ -0.77
RNF4-221ENST00000513643 SPECC1L-ADORA2AF8WAN1 911 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 LEFTY2O00292 366 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 TULP2O00295 520 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 MBD3O95983 291 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 DCNP07585 359 aaKnown RBP10.25□□□□□ -0.77
RNF4-221ENST00000513643 CHRNB1P11230 501 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 TRIM21P19474 475 aaKnown RBP10.25□□□□□ -0.77
RNF4-221ENST00000513643 SLC9A1P19634 815 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 PON1P27169 355 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 CTHP32929 405 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 PLA2G5P39877 138 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 MAGEA9P43362 315 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 PTPN5P54829 565 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 YWHAEP62258 255 aaKnown RBP10.25□□□□□ -0.77
RNF4-221ENST00000513643 NHLH1Q02575 133 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 RUNX3Q13761 415 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 MTF1Q14872 753 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 PDGFRLQ15198 375 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 GAB4Q2WGN9 574 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 EML3Q32P44 896 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 ITPRIPL2Q3MIP1 535 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 HECTD3Q5T447 861 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 RRAGAQ7L523 313 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 PIGZQ86VD9 579 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 YAF2Q8IY57 180 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 SCML4Q8N228 414 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 SLC35F5Q8WV83 523 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 KCTD13Q8WZ19 329 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 FAM3CQ92520 227 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 NELL1Q92832 810 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 DNAI2Q9GZS0 605 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 HSD3B7Q9H2F3 369 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 LINC00597Q9H2U6 94 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 NMUR1Q9HB89 426 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 SAMSN1Q9NSI8 373 aaKnown RBP10.25□□□□□ -0.77
RNF4-221ENST00000513643 CLIC5Q9NZA1 410 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 GMIPQ9P107 970 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 TMEM63CQ9P1W3 806 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 DACH1Q9UI36 760 aa10.25□□□□□ -0.77
RNF4-221ENST00000513643 LRRC10BA6NIK2 292 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 BECN2A8MW95 431 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 GOLGA6L22H0YM25 854 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 TRDMT1O14717 391 aaKnown RBP10.24□□□□□ -0.77
RNF4-221ENST00000513643 XPO1O14980 1071 aaKnown RBP10.24□□□□□ -0.77
RNF4-221ENST00000513643 CKMP06732 381 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 ARSAP15289 507 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 SOX9P48436 509 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 PDE4CQ08493 712 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 KCNMA1Q12791 1236 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 CCINQ13939 588 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 MEA1Q16626 185 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 MAN2A1Q16706 1144 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 VWA3BQ502W6 1294 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 SGO2Q562F6 1265 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 TMEM270Q6UE05 265 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 ENOSF1Q7L5Y1 443 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 PPM1KQ8N3J5 372 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 FAM81BQ96LP2 452 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 TUBGCP2Q9BSJ2 902 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 KLF16Q9BXK1 252 aaPredicted RBP10.24□□□□□ -0.77
RNF4-221ENST00000513643 CHRDQ9H2X0 955 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 NDST4Q9H3R1 872 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 CCSER2Q9H7U1 834 aa10.24□□□□□ -0.77
RNF4-221ENST00000513643 ECT2Q9H8V3 914 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms