RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 BAATQ14032 418 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ACAP1Q15027 740 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ANGPT1Q15389 498 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 DGKDQ16760 1214 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SLC10A6Q3KNW5 377 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 GAGE13Q4V321 117 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 CCDC62Q6P9F0 684 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 GIMAP6Q6P9H5 292 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 KCNV1Q6PIU1 500 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 KCNT2Q6UVM3 1135 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 RD3Q7Z3Z2 195 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SERINC5Q86VE9 423 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 CCDC105Q8IYK2 499 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 KIAA2013Q8IYS2 634 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ZNF444Q8N0Y2 327 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 BCL6BQ8N143 479 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ST13P5Q8NFI4 369 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SPPL3Q8TCT6 385 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 KCNG4Q8TDN1 519 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SSH3Q8TE77 659 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 KAT2BQ92831 832 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 EAF2Q96CJ1 260 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ZNF689Q96CS4 500 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SLC7A6OSQ96CW6 309 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 SGSM3Q96HU1 749 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 NECTIN4Q96NY8 510 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 NEK1Q96PY6 1258 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ALG1Q9BT22 464 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 IFIH1Q9BYX4 1025 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 CCDC113Q9H0I3 377 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 MFSD1Q9H3U5 465 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 PRDM13Q9H4Q3 707 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 HOMER2Q9NSB8 354 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 HDAC6Q9UBN7 1215 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 DBNLQ9UJU6 430 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 NOB1Q9ULX3 412 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 FAM208BQ5VWN6 2430 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 GREB1LQ9C091 1923 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 MYH4Q9Y623 1939 aa4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 MAP1BP46821 2468 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-218ENST00000513341 ZBED9Q6R2W3 1325 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 PNMA6EA0A0J9YXQ4 647 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 B2RBV5 119 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 MAN2B1O00754 1011 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 CLASP2O75122 1294 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 SURF6O75683 361 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 GH1P01241 217 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 MMP3P08254 477 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 MC4RP32245 332 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 SLC1A4P43007 532 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 NRIP1P48552 1158 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 OS9Q13438 667 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 SERINC3Q13530 473 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 KCNC3Q14003 757 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 BTG3Q14201 252 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 HSP90AA2PQ14568 343 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 UBE3CQ15386 1083 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 NTRK3Q16288 839 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 C1QL3Q5VWW1 255 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 CTR9Q6PD62 1173 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 KLHDC10Q6PID8 442 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 NSMFQ6X4W1 530 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 ARHGAP36Q6ZRI8 547 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 LCORLQ8N3X6 602 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 DNAJC2Q99543 621 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 CCDC8Q9H0W5 538 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 OSBPL2Q9H1P3 480 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 S1PR5Q9H228 398 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 TLE6Q9H808 572 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 MTMR4Q9NYA4 1195 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 ARPP21Q9UBL0 812 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 MSRB2Q9Y3D2 182 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 USP24Q9UPU5 2620 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 DMXL1Q9Y485 3027 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 VPS13AQ96RL7 3174 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 OTOGLQ3ZCN5 2332 aa4.26□□□□□ -1.73
PDLIM5-218ENST00000513341 ADGRA3Q8IWK6 1321 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ATG2AQ2TAZ0 1938 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 BAZ2AQ9UIF9 1905 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 FASNP49327 2511 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ENPP3O14638 875 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 IPO8O15397 1037 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 PRKAB2O43741 272 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 H2AFYO75367 372 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 GJB6O95452 261 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 GLP2RO95838 553 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 F2P00734 622 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 HOXC8P31273 242 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 THPOP40225 353 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 STAT5BP51692 787 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 TTC3P53804 2025 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ATP2C1P98194 919 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ITIH3Q06033 890 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ARHGAP1Q07960 439 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 SLFN5Q08AF3 891 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 KIAA0753Q2KHM9 967 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 CCDC184Q52MB2 194 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 MUM1L1Q5H9M0 696 aa4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 DCAF17Q5H9S7 520 aaPredicted RBP4.25□□□□□ -1.73
PDLIM5-218ENST00000513341 ZSCAN25Q6NSZ9 544 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms