RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 KCNA3P22001 575 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 MAP2K6P52564 334 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 COPB1P53618 953 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 WNT3P56703 355 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 SOX8P57073 446 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 SUMO2P61956 95 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 HSF1Q00613 529 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 ODF1Q14990 250 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 ZIK1Q3SY52 487 aaPredicted RBP3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 ATG9BQ674R7 924 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 TMEM65Q6PI78 240 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 PTCHD4Q6ZW05 846 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 PCSK9Q8NBP7 692 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 CTHRC1Q96CG8 243 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 MEIS3Q99687 375 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 TMEM204Q9BSN7 226 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 MCM8Q9UJA3 840 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 MAFFQ9ULX9 164 aa3.59□□□□□ -1.83
SCAMP1-204ENST00000511551 CES2O00748 559 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 ZRANB2O95218 330 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 NCLP19338 710 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 B4GALNT1Q00973 533 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 PLS1Q14651 629 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 ABCB5Q2M3G0 1257 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 ZNF750Q32MQ0 723 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 SLC9C1Q4G0N8 1177 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 C9orf50Q5SZB4 431 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 DDX42Q86XP3 938 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 RAB11FIP4Q86YS3 637 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 RFX6Q8HWS3 928 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 MIER2Q8N344 545 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 BRIX1Q8TDN6 353 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 NR4A3Q92570 626 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 GPATCH3Q96I76 525 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 ZNF479Q96JC4 524 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 C17orf80Q9BSJ5 609 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 SLC13A1Q9BZW2 595 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 SPC25Q9HBM1 224 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 TRHDEQ9UKU6 1024 aa3.58□□□□□ -1.84
SCAMP1-204ENST00000511551 PSMD9O00233 223 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 FOXN3O00409 490 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 GAS8-AS1O95177 125 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 THP07101 528 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 NGFRP08138 427 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 XRCC6P12956 609 aaKnown RBP eCLIP3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 DIO1P49895 249 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 UCP3P55916 312 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 ASIC2Q16515 512 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 MGAT5BQ3V5L5 792 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 RNF187Q5TA31 235 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 TTBK1Q5TCY1 1321 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 VSTM1Q6UX27 236 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 DCDC5Q6ZRR9 648 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 GAS2L3Q86XJ1 694 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 MRPL44Q9H9J2 332 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 MED16Q9Y2X0 877 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 TMX2Q9Y320 296 aa3.57□□□□□ -1.84
SCAMP1-204ENST00000511551 PRSS47A8MTI9 375 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 SLC11A2P49281 568 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 AMPD3Q01432 767 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 STIM1Q13586 685 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 INPP5JQ15735 1006 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 PTPROQ16827 1216 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 EARS2Q5JPH6 523 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 MANEAQ5SRI9 462 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 DENND2CQ68D51 928 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 USP45Q70EL2 814 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 PNMA8AQ86V59 439 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 MAFAQ8NHW3 353 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 LPAR3Q9UBY5 353 aa3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 DRG1Q9Y295 367 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-204ENST00000511551 H3BUI4 141 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 DTNBO60941 627 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 PLA2G2AP14555 144 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 TNFRSF8P28908 595 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 PGGT1BP53609 377 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 YPEL5P62699 121 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 CFHR3Q02985 330 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 KRT17Q04695 432 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 MLC1Q15049 377 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 KHDC1LQ5JSQ8 128 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 SLC25A28Q96A46 364 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 SLC35A4Q96G79 324 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 NLRP4Q96MN2 994 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 PCDH12Q9NPG4 1184 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 SNX15Q9NRS6 342 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 GJB4Q9NTQ9 266 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 PCDHA6Q9UN73 950 aa3.55□□□□□ -1.84
SCAMP1-204ENST00000511551 IFITM10A6NMD0 228 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 POU2F2P09086 479 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 CPA2P48052 419 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 BCAT1P54687 386 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 MTMR1Q13613 665 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 CCNIQ14094 377 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 KCNB1Q14721 858 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 CERCAMQ5T4B2 595 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 GFI1BQ5VTD9 330 aa3.54□□□□□ -1.84
SCAMP1-204ENST00000511551 ZNF324BQ6AW86 544 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms