RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 YIPF1Q9Y548 306 aa9.12□□□□□ -0.95
NFKB1-209ENST00000510638 PCDHA13Q9Y5I0 950 aa9.12□□□□□ -0.95
NFKB1-209ENST00000510638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
NFKB1-209ENST00000510638 CHD6Q8TD26 2715 aa9.12□□□□□ -0.95
NFKB1-209ENST00000510638 SCN1AP35498 2009 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 GOLGA6L9A6NEM1 432 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 EPOPA6NHQ4 379 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 CLASP2O75122 1294 aaKnown RBP9.11□□□□□ -0.95
NFKB1-209ENST00000510638 C8AP07357 584 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 TMEM253P0C7T8 217 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 CSH1P0DML2 217 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 CSH2P0DML3 217 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 LCP1P13796 627 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 DESP17661 470 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 ABCB4P21439 1286 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 NRIP1P48552 1158 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 CLCN4P51793 760 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 TKTL1P51854 596 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 VAV2P52735 878 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 SLC5A3P53794 718 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 GALCP54803 685 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 GPC5P78333 572 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 ADIGQ0VDE8 80 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 DUSP6Q16828 381 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 DDR2Q16832 855 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 PTPN20Q4JDL3 420 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 PPM1LQ5SGD2 360 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 PMF1Q6P1K2 205 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 DNAJC24Q6P3W2 148 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 LILRA6Q6PI73 481 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 DENND5BQ6ZUT9 1274 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 MON1BQ7L1V2 547 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 TMEM110Q86TL2 294 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 RBM23Q86U06 439 aaKnown RBP9.11□□□□□ -0.95
NFKB1-209ENST00000510638 NUP93Q8N1F7 819 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 WDTC1Q8N5D0 677 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 ACRBPQ8NEB7 543 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 SLC7A14Q8TBB6 771 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 SLITRK1Q96PX8 696 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 CPXM1Q96SM3 734 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 KCNK16Q96T55 309 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 PHOX2BQ99453 314 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 C11orf70Q9BRQ4 267 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 DESI2Q9BSY9 194 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 IRF2BPLQ9H1B7 796 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 MRPL47Q9HD33 250 aaKnown RBP9.11□□□□□ -0.95
NFKB1-209ENST00000510638 CNGB3Q9NQW8 809 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 PARVAQ9NVD7 372 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 TAS2R14Q9NYV8 317 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 UXTQ9UBK9 157 aaPredicted RBP9.11□□□□□ -0.95
NFKB1-209ENST00000510638 FBXW11Q9UKB1 542 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 ASB3Q9Y575 518 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 PCDHGC5Q9Y5F6 944 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 INSL5Q9Y5Q6 135 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 ADGRG1Q9Y653 693 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 SCINQ9Y6U3 715 aa9.11□□□□□ -0.95
NFKB1-209ENST00000510638 E5RJQ4 531 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 RFXAPO00287 272 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 TULP2O00295 520 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 PER2O15055 1255 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 NCK2O43639 380 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 KRT86O43790 486 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 XYLBO75191 536 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 BEST1O76090 585 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 SEC24AO95486 1093 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ZBED1O96006 694 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ERBB2P04626 1255 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 HNRNPA1P09651 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 SPATA31D3P0C874 917 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 YWHAQP27348 245 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 HOXA9P31269 272 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 SCNN1AP37088 669 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 GABRB2P47870 512 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 RPL34P49207 117 aaKnown RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 CACNA2D1P54289 1103 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 TWF1Q12792 350 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 IFRD2Q12894 506 aaPredicted RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ZNF268Q14587 947 aaPredicted RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 IFI16Q16666 785 aaKnown RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ARHGAP29Q52LW3 1261 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 EFHC1Q5JVL4 640 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 OR6B2Q6IFH4 312 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 SPATA31D4Q6ZUB0 917 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 TTC9BQ8N6N2 239 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 C3orf20Q8ND61 904 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ZMIZ2Q8NF64 920 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 IRGQQ8WZA9 623 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 CASP10Q92851 521 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ZNF512Q96ME7 567 aaPredicted RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 SELENOOQ9BVL4 669 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 AVENQ9NQS1 362 aaPredicted RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 MAN1C1Q9NR34 630 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 DZANK1Q9NVP4 752 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 ZDHHC7Q9NXF8 308 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 CTTNBP2NLQ9P2B4 639 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 MYO1AQ9UBC5 1043 aa9.1□□□□□ -0.95
NFKB1-209ENST00000510638 CNOT8Q9UFF9 292 aaKnown RBP9.1□□□□□ -0.95
NFKB1-209ENST00000510638 CYTH4Q9UIA0 394 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms