RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TMCC3Q9ULS5 477 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 GUCA1CO95843 209 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 CRKLP46109 303 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 ST3GAL1Q11201 340 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 RTKN2Q8IZC4 609 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 DPP10Q8N608 796 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 SPATA16Q9BXB7 569 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ING4Q9UNL4 249 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ALG6Q9Y672 507 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 CHD2O14647 1828 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 KRT34O76011 436 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 NAA30Q147X3 362 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 TSPAN14Q8NG11 270 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 CHP1Q99653 195 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 CORO2BQ9UQ03 480 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 EFCAB6Q5THR3 1501 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 MZT2AQ6P582 158 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ZCCHC9Q8N567 271 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 TRIM39Q9HCM9 518 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 PLK2Q9NYY3 685 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 MTRF1O75570 445 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 CRABP2P29373 138 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 PNPLA4P41247 253 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ACLYP53396 1101 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 IGDCC4Q8TDY8 1250 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TATDN2Q93075 761 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 LRRC40Q9H9A6 602 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ALG13Q9NP73 1137 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 CASS4Q9NQ75 786 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 LDLRP01130 860 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 PABPC1P11940 636 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 PCSK1P29120 753 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ITGB3BPQ13352 177 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 MTF1Q14872 753 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ACAD10Q6JQN1 1059 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 APPL2Q8NEU8 664 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 JPH1Q9HDC5 661 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 EXOSC4Q9NPD3 245 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 DAPK2Q9UIK4 370 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 MYH1P12882 1939 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 MYH4Q9Y623 1939 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TAF4O00268 1085 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 RAG1P15918 1043 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 PTDSS1P48651 473 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 POU4F1Q01851 419 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TRAF3Q13114 568 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ACAP1Q15027 740 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TMEM63BQ5T3F8 832 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 MRNIPQ6NTE8 343 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 KSR1Q8IVT5 923 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 SCAIQ8N9R8 606 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 MMTAG2Q9BU76 263 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 SLC25A23Q9BV35 468 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 DHX35Q9H5Z1 703 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 AGPAT5Q9NUQ2 364 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 RRN3Q9NYV6 651 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ZNF219Q9P2Y4 722 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 PTGER2P43116 358 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TNFAIP8L3Q5GJ75 292 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 FGD2Q7Z6J4 655 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 APOPT1Q96IL0 206 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 ICE1Q9Y2F5 2266 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 IRGMA1A4Y4 181 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 PAX7P23759 505 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TKFCQ3LXA3 575 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 C4orf33Q8N1A6 199 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 LRMDAQ9H2I8 198 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 FAM124BQ9H5Z6 455 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 IPPQ9Y573 584 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TRIM25Q14258 630 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 MAPK11Q15759 364 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 STXBP2Q15833 593 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 C2CD6Q53TS8 623 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TAS2R42Q7RTR8 314 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 SPRTNQ9H040 489 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 ING3Q9NXR8 418 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 CDKAL1Q5VV42 579 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 TSHZ1Q6ZSZ6 1077 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 CCDC149Q6ZUS6 474 aa8.64□□□□□ -1.03
HTT-208ENST00000510626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.64□□□□□ -1.03
HTT-208ENST00000510626 NOL6Q9H6R4 1146 aaKnown RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 MARCOQ9UEW3 520 aaPredicted RBP8.64□□□□□ -1.03
HTT-208ENST00000510626 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
HTT-208ENST00000510626 KCTD1Q719H9 257 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 DHFR2Q86XF0 187 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 FEZF2Q8TBJ5 459 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 URGCPQ8TCY9 931 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 Q96MT0 163 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 FAM213AQ9BRX8 229 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 PCDHA10Q9Y5I2 948 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 MAPTP10636 758 aaKnown RBP8.63□□□□□ -1.03
HTT-208ENST00000510626 ZNF844Q08AG5 666 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 GRTP1Q5TC63 336 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 HAUS6Q7Z4H7 955 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 TTC30BQ8N4P2 665 aa8.63□□□□□ -1.03
HTT-208ENST00000510626 MAP3K20Q9NYL2 800 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms