RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 SCUBE3Q8IX30 993 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 MYLIPQ8WY64 445 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 CDX2Q99626 313 aaPredicted RBP17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 CNPY3Q9BT09 278 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 RNF14Q9UBS8 474 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 STAP1Q9ULZ2 295 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 ALG6Q9Y672 507 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 SAR1BQ9Y6B6 198 aa17.56■□□□□ 0.4
SCAMP1-203ENST00000510030 TULP2O00295 520 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 C2CD2LO14523 706 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 DPYSL4O14531 572 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 PSTPIP1O43586 416 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 ABLIM3O94929 683 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 OR4Q2P0C623 313 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 HAPLN1P10915 354 aaPredicted RBP17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 GPD1P21695 349 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 CYP2F1P24903 491 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 PSMA2P25787 234 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 PSEN1P49768 467 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 ZNF143P52747 638 aaPredicted RBP17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 YWHAZP63104 245 aaKnown RBP17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 HADHQ16836 314 aaKnown RBP17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 MGAT5BQ3V5L5 792 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 PM20D1Q6GTS8 502 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 NT5DC3Q86UY8 548 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 SCN4BQ8IWT1 228 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 NUP93Q8N1F7 819 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 ZMIZ2Q8NF64 920 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 KCNK16Q96T55 309 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 CLSTN3Q9BQT9 956 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 POPDC2Q9HBU9 364 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 TLR9Q9NR96 1032 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 DPP7Q9UHL4 492 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 TMEM59LQ9UK28 342 aa17.55■□□□□ 0.4
SCAMP1-203ENST00000510030 WDR27A2RRH5 827 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 LCHNA4D1U4 455 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 HHLA1C9JL84 531 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 DAB1O75553 588 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 BEST1O76090 585 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 RFC1P35251 1148 aaPredicted RBP17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 PTPN9P43378 593 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 DAOAP59103 153 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 VEPH1Q14D04 833 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 CCDC142Q17RM4 750 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 LRRC38Q5VT99 294 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 RNF19BQ6ZMZ0 732 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 DENND5BQ6ZUT9 1274 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 RHOT1Q8IXI2 618 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 FAM149B1Q96BN6 582 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 HES6Q96HZ4 224 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 PBKQ96KB5 322 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 SEPT5Q99719 369 aaPredicted RBP17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 TCF25Q9BQ70 676 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 LMAN2LQ9H0V9 348 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 SNX12Q9UMY4 172 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 USP3Q9Y6I4 520 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 PLXNA4Q9HCM2 1894 aa17.54■□□□□ 0.4
SCAMP1-203ENST00000510030 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 C2CD4BA6NLJ0 364 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 CAPN9O14815 690 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 URI1O94763 535 aaPredicted RBP17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 FTCDO95954 541 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 CA3P07451 260 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 KRT7P08729 469 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 PDGFRAP16234 1089 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 COMTP21964 271 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 CTNNA2P26232 953 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 NOS2P35228 1153 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 PCK1P35558 622 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 CETN2P41208 172 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 MATKP42679 507 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 ALDH1A3P47895 512 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 SLC5A3P53794 718 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 ERVK-21P61565 698 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 RPL7AP62424 266 aaKnown RBP17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 ADCY1Q08828 1119 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 CCDC149Q6ZUS6 474 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 POLNQ7Z5Q5 900 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 ATAD1Q8NBU5 361 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 PDZD8Q8NEN9 1154 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 PGLYRP2Q96PD5 576 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 ULBP1Q9BZM6 244 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 CARD9Q9H257 536 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 RRAGDQ9NQL2 400 aaPredicted RBP17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 VCANP13611 3396 aa17.53■□□□□ 0.4
SCAMP1-203ENST00000510030 GBF1Q92538 1859 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 TMEM110-MUSTN1A8MSY1 372 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 GRXCR1A8MXD5 290 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 PRRG1O14668 218 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 TNFRSF10BO14763 440 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 LILRB3O75022 631 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 CXCL14O95715 111 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 LTFP02788 710 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 ATP1A1P05023 1023 aaKnown RBP17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 CSH1P0DML2 217 aa17.52■□□□□ 0.4
SCAMP1-203ENST00000510030 CSH2P0DML3 217 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms