RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 FAM177A1Q8N128 213 aaPredicted RBP11.6□□□□□ -0.55
SNF8-207ENST00000509995 CACTIN-AS1Q8N1I8 211 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 KIFAP3Q92845 792 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 CNDP2Q96KP4 475 aaKnown RBP11.6□□□□□ -0.55
SNF8-207ENST00000509995 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 POLD4Q9HCU8 107 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 TMLHEQ9NVH6 421 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 SEPT3Q9UH03 358 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 DSEQ9UL01 958 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 RAD54BQ9Y620 910 aa11.6□□□□□ -0.55
SNF8-207ENST00000509995 ZFHX3Q15911 3703 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 ANO9A1A5B4 782 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 ARHGEF35A5YM69 484 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 K7ENP7 123 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 KCNK3O14649 394 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 XPOTO43592 962 aaKnown RBP11.59□□□□□ -0.55
SNF8-207ENST00000509995 TULP3O75386 442 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 IGHDP01880 384 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 PFKLP17858 780 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 GLDCP23378 1020 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 PAX3P23760 479 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 GRIA4P48058 902 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 RPL10AP62906 217 aaKnown RBP11.59□□□□□ -0.55
SNF8-207ENST00000509995 TEAD4Q15561 434 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 LY6G5CQ5SRR4 150 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 INO80CQ6PI98 192 aaPredicted RBP11.59□□□□□ -0.55
SNF8-207ENST00000509995 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 CATSPER3Q86XQ3 398 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 TRIM22Q8IYM9 498 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 THEM5Q8N1Q8 247 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 NAT16Q8N8M0 369 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 EXD3Q8N9H8 876 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 BRF1Q92994 677 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
SNF8-207ENST00000509995 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNF8-207ENST00000509995 DPH1Q9BZG8 443 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 TMEM134Q9H6X4 195 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 STARD5Q9NSY2 213 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 DEC1Q9P2X7 70 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 CLCA2Q9UQC9 943 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 SSUH2Q9Y2M2 353 aa11.59□□□□□ -0.55
SNF8-207ENST00000509995 ARID1BQ8NFD5 2236 aaPredicted RBP11.59□□□□□ -0.55
SNF8-207ENST00000509995 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 CLEC18AA5D8T8 446 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 LAD1O00515 517 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 DEXIO95424 95 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 LDOC1O95751 146 aaPredicted RBP11.58□□□□□ -0.56
SNF8-207ENST00000509995 SLC7A9P82251 487 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 GAD2Q05329 585 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 PPP2R3AQ06190 1150 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 NFE2Q16621 373 aaPredicted RBP11.58□□□□□ -0.56
SNF8-207ENST00000509995 LAYNQ6UX15 382 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 CLEC18BQ6UXF7 455 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 PIK3AP1Q6ZUJ8 805 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 METTL23Q86XA0 190 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 DCBLD1Q8N8Z6 715 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 CLEC18CQ8NCF0 446 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 LEO1Q8WVC0 666 aaPredicted RBP11.58□□□□□ -0.56
SNF8-207ENST00000509995 RFFLQ8WZ73 363 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 SNX19Q92543 992 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 AIFM3Q96NN9 605 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 NCOA5Q9HCD5 579 aaKnown RBP11.58□□□□□ -0.56
SNF8-207ENST00000509995 TUFT1Q9NNX1 390 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 ANO2Q9NQ90 1003 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 ITM2CQ9NQX7 267 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 ARHGAP28Q9P2N2 729 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 MAN2B2Q9Y2E5 1009 aa11.58□□□□□ -0.56
SNF8-207ENST00000509995 HOXC11O43248 304 aaPredicted RBP11.57□□□□□ -0.56
SNF8-207ENST00000509995 MED24O75448 989 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 TOM1L1O75674 476 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
SNF8-207ENST00000509995 CYP2F1P24903 491 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 OXTRP30559 389 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 CTSKP43235 329 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 NPTX2P47972 431 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 TPMTP51580 245 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 TSPY1Q01534 308 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 CALCRLQ16602 461 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 SPATA1Q5VX52 437 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 C9orf57Q5W0N0 161 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 WSCD1Q658N2 575 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 Q6ZUG5 572 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 GATAD2AQ86YP4 633 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 KRI1Q8N9T8 703 aaKnown RBP11.57□□□□□ -0.56
SNF8-207ENST00000509995 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
SNF8-207ENST00000509995 TM9SF3Q9HD45 589 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 OSGEPQ9NPF4 335 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 CFAP97Q9P2B7 532 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 KCNJ14Q9UNX9 436 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 CPQQ9Y646 472 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 CKAP5Q14008 2032 aa11.57□□□□□ -0.56
SNF8-207ENST00000509995 LRBAP50851 2863 aa11.56□□□□□ -0.56
SNF8-207ENST00000509995 A0A1B0GTQ1 180 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms