RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SLC9A1P19634 815 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 ELF1P32519 619 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 GNL1P36915 607 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 PPP1R2P41236 205 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 SLC5A3P53794 718 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 VCPP55072 806 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 KCNMA1Q12791 1236 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 USP4Q13107 963 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 STIM1Q13586 685 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 GRM2Q14416 872 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 NFE2Q16621 373 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 OCLNQ16625 522 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 ZNF394Q53GI3 561 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 PPP1R26Q5T8A7 1209 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 NAIF1Q69YI7 327 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 KIAA1549LQ6ZVL6 1849 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 HFE2Q6ZVN8 426 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 PDZD4Q76G19 769 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 RTL10Q7L3V2 364 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 OTOP3Q7RTS5 596 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 SPATA2LQ8IUW3 424 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 SCN4BQ8IWT1 228 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 DHX40Q8IX18 779 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 DCP1BQ8IZD4 617 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 CRYBG2Q8N1P7 616 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 THEM5Q8N1Q8 247 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 SCAMP5Q8TAC9 235 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 TRMT2BQ96GJ1 504 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 C8orf48Q96LL4 319 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 MYRFLQ96LU7 910 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 ARHGAP9Q9BRR9 750 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 CRACR2AQ9BSW2 395 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 SLC46A2Q9BY10 475 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 SNX25Q9H3E2 840 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 THAP9Q9H5L6 903 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 CSNK1G1Q9HCP0 422 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 ASAH2Q9NR71 780 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 OSER1Q9NX31 292 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 TAB2Q9NYJ8 693 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 IL37Q9NZH6 218 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 DACH1Q9UI36 760 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 MAFFQ9ULX9 164 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 NFE2L3Q9Y4A8 694 aa7.65□□□□□ -1.18
TOPBP1-207ENST00000509162 FAM92AA1XBS5 289 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ANTXRLA6NF34 631 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 O00370 1275 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 CYP26A1O43174 497 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 SIAH2O43255 324 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 MICAL2O94851 1124 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 MBD3O95983 291 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 FAM163BP0C2L3 166 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ZDHHC11BP0C7U3 371 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 PTPN2P17706 415 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ERCC5P28715 1186 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ADORA2BP29275 332 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 KRT31Q15323 416 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 KLHL40Q2TBA0 621 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 GPR158Q5T848 1215 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 TXNDC8Q6A555 127 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 TRIM65Q6PJ69 517 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 RRAGAQ7L523 313 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 UNC93AQ86WB7 457 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 SLC44A3Q8N4M1 653 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ZSCAN18Q8TBC5 510 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ENOX1Q8TC92 643 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 EDAQ92838 391 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 USP13Q92995 863 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 SPATA17Q96L03 361 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 HNRNPABQ99729 332 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 LRFN3Q9BTN0 628 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 GTPBP4Q9BZE4 634 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 GANQ9H2C0 597 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 CYP3A43Q9HB55 503 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 NMUR1Q9HB89 426 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 TRPV4Q9HBA0 871 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 METTL14Q9HCE5 456 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 DNAAF2Q9NVR5 837 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 GMIPQ9P107 970 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 TJP2Q9UDY2 1190 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 DPP7Q9UHL4 492 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 CYTH4Q9UIA0 394 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 SORCS3Q9UPU3 1222 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 CNTN6Q9UQ52 1028 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 NR2E1Q9Y466 385 aa7.64□□□□□ -1.19
TOPBP1-207ENST00000509162 ZNF840PA6NDX5 716 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 TMEM221A6NGB7 291 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 OTOL1A6NHN0 477 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 KCNJ18B7U540 433 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 M0R296 226 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SCAMP3O14828 347 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 P4HA2O15460 535 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ECI2O75521 394 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 OAS1P00973 400 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 GLULP15104 373 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 PON1P27169 355 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 HOXC13P31276 330 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 ALDH1A3P47895 512 aa7.63□□□□□ -1.19
TOPBP1-207ENST00000509162 SERPINB4P48594 390 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms