RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 POLR3BQ9NW08 1133 aaPredicted RBP23.39■■□□□ 1.33
PACRGL-220ENST00000508952 IL37Q9NZH6 218 aa23.39■■□□□ 1.33
PACRGL-220ENST00000508952 GMIPQ9P107 970 aa23.39■■□□□ 1.33
PACRGL-220ENST00000508952 CETN3O15182 167 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 COCHO43405 550 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 NR1H3Q13133 447 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 ZNF658Q5TYW1 1059 aaPredicted RBP23.38■■□□□ 1.33
PACRGL-220ENST00000508952 KRT39Q6A163 491 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 LONP2Q86WA8 852 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 SEMA4DQ92854 862 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 JAKMIP2Q96AA8 810 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 GSDMAQ96QA5 445 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 CCSER2Q9H7U1 834 aa23.38■■□□□ 1.33
PACRGL-220ENST00000508952 CEP250Q9BV73 2442 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 HRO43593 1189 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 SMC2O95347 1197 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 EPB41P11171 864 aaKnown RBP23.37■■□□□ 1.33
PACRGL-220ENST00000508952 ID4P47928 161 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 PGFP49763 221 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 CCDC150Q8NCX0 1101 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 WHAMMQ8TF30 809 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 EXOC4Q96A65 974 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 NT5C1AQ9BXI3 368 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 CYP3A43Q9HB55 503 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 CSNK1G1Q9HCP0 422 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 RAB23Q9ULC3 237 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 PCDHA5Q9Y5H7 936 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 MYOFQ9NZM1 2061 aa23.37■■□□□ 1.33
PACRGL-220ENST00000508952 FAM92AA1XBS5 289 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 CILPO75339 1184 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 CYP17A1P05093 508 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 FAM200BP0CF97 657 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 GTF2H1P32780 548 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 PXNP49023 591 aaPredicted RBP23.36■■□□□ 1.33
PACRGL-220ENST00000508952 MXI1P50539 228 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 MCCD1P59942 119 aaPredicted RBP23.36■■□□□ 1.33
PACRGL-220ENST00000508952 SIM2Q14190 667 aaPredicted RBP23.36■■□□□ 1.33
PACRGL-220ENST00000508952 GAB4Q2WGN9 574 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 HECTD3Q5T447 861 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 CLEC20AQ6ZU45 233 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 GPRIN1Q7Z2K8 1008 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 SPATA20Q8TB22 786 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 SECISBP2LQ93073 1101 aaKnown RBP23.36■■□□□ 1.33
PACRGL-220ENST00000508952 SMARCE1Q969G3 411 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 CYFIP2Q96F07 1278 aa23.36■■□□□ 1.33
PACRGL-220ENST00000508952 ZFRQ96KR1 1074 aaKnown RBP23.36■■□□□ 1.33
PACRGL-220ENST00000508952 HNRNPABQ99729 332 aaKnown RBP23.36■■□□□ 1.33
PACRGL-220ENST00000508952 TRIM49BA6NDI0 452 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 ATG13O75143 517 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 ZDHHC11BP0C7U3 371 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 TRIM21P19474 475 aaKnown RBP23.35■■□□□ 1.33
PACRGL-220ENST00000508952 OPRD1P41143 372 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 PMS1P54277 932 aaKnown RBP23.35■■□□□ 1.33
PACRGL-220ENST00000508952 COBLL1Q53SF7 1204 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 SNX30Q5VWJ9 437 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 ANKRD40Q6AI12 368 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 DDX42Q86XP3 938 aaKnown RBP eCLIP23.35■■□□□ 1.33
PACRGL-220ENST00000508952 ADGRG2Q8IZP9 1017 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 FBXL13Q8NEE6 735 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 RPLP0P6Q8NHW5 317 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 TSG101Q99816 390 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 COMMD8Q9NX08 183 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 GMEB2Q9UKD1 530 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 SLC8A2Q9UPR5 921 aa23.35■■□□□ 1.33
PACRGL-220ENST00000508952 SLC9A3R1O14745 358 aaPredicted RBP23.34■■□□□ 1.33
PACRGL-220ENST00000508952 HOXA6P31267 233 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 DHCR24Q15392 516 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 FBXO43Q4G163 708 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 ZNF394Q53GI3 561 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 DCAF17Q5H9S7 520 aaPredicted RBP23.34■■□□□ 1.33
PACRGL-220ENST00000508952 TCERG1LQ5VWI1 586 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 WDR5BQ86VZ2 330 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 RMDN1Q96DB5 314 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 TIGD1Q96MW7 591 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 RAB20Q9NX57 234 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 EML5Q05BV3 1969 aa23.34■■□□□ 1.33
PACRGL-220ENST00000508952 HHLA1C9JL84 531 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 STX10O60499 249 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 CNR2P34972 360 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 TUBP50607 506 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 CBWD6Q4V339 395 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 CBWD3Q5JTY5 395 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 CBWD5Q5RIA9 395 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 LAIR1Q6GTX8 287 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 ISM2Q6H9L7 571 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 ZC3H3Q8IXZ2 948 aaKnown RBP23.33■■□□□ 1.33
PACRGL-220ENST00000508952 KIAA1958Q8N8K9 716 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 WBP2Q969T9 261 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 HHIPQ96QV1 700 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 ARID3AQ99856 593 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 FBXO44Q9H4M3 255 aa23.33■■□□□ 1.33
PACRGL-220ENST00000508952 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.33
PACRGL-220ENST00000508952 DNAH14Q0VDD8 3507 aa23.32■■□□□ 1.32
PACRGL-220ENST00000508952 ANTXRLA6NF34 631 aa23.32■■□□□ 1.32
PACRGL-220ENST00000508952 SLC16A3O15427 465 aaKnown RBP23.32■■□□□ 1.32
PACRGL-220ENST00000508952 CYP26A1O43174 497 aa23.32■■□□□ 1.32
PACRGL-220ENST00000508952 TLR5O60602 858 aa23.32■■□□□ 1.32
PACRGL-220ENST00000508952 IRF1P10914 325 aa23.32■■□□□ 1.32
PACRGL-220ENST00000508952 ACO1P21399 889 aaKnown RBP23.32■■□□□ 1.32
PACRGL-220ENST00000508952 SEC13P55735 322 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms