RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 RAP1GAP2Q684P5 730 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 DTX2Q86UW9 622 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 RAB11FIP4Q86YS3 637 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 C1orf210Q8IVY1 113 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 NRSN1Q8IZ57 195 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 SYNE4Q8N205 404 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 CPEB3Q8NE35 698 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 DNAJB14Q8TBM8 379 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 PNISRQ8TF01 805 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 SLC25A43Q8WUT9 341 aaPredicted RBP4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 OSCP1Q8WVF1 389 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 NACC2Q96BF6 587 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 HIST1H2AAQ96QV6 131 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 NUDT22Q9BRQ3 303 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 KATNAL1Q9BW62 490 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 UBA5Q9GZZ9 404 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 UNKLQ9H9P5 680 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 TBCCD1Q9NVR7 557 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 GRHPRQ9UBQ7 328 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 PGAP2Q9UHJ9 254 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 ANAPC4Q9UJX5 808 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 USP22Q9UPT9 525 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 SSX2IPQ9Y2D8 614 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 MAP3K2Q9Y2U5 619 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
COL4A3BP-205ENST00000508692 FAM20BO75063 409 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 CSF1RP07333 972 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 SRGAP2BP0DMP2 458 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 CD19P15391 556 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 PAX3P23760 479 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 GATA3P23771 443 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 UQCRC1P31930 480 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 MTHFSP49914 203 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 PGDP52209 483 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 FAM189BP81408 668 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 GUCY1B3Q02153 619 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 GPS1Q13098 491 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 KCNAB1Q14722 419 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 PTCHD3Q3KNS1 767 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 ARHGAP15Q53QZ3 475 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 KLHL17Q6TDP4 642 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 CCDC117Q8IWD4 279 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 ABRAQ8N0Z2 381 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 PAF1Q8N7H5 531 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 B3GALNT2Q8NCR0 500 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 MBD3L2Q8NHZ7 208 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 OTUD7AQ8TE49 926 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 STYXQ8WUJ0 223 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 WDR60Q8WVS4 1066 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 ATRIPQ8WXE1 791 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 GRAMD1AQ96CP6 724 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 CRAMP1Q96RY5 1269 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 TPSD1Q9BZJ3 242 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 TP63Q9H3D4 680 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZNF768Q9H5H4 540 aaKnown RBP4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 GBA2Q9HCG7 927 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 SAYSD1Q9NPB0 183 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 CASS4Q9NQ75 786 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 TRIM36Q9NQ86 728 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 CEP72Q9P209 647 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 DKK2Q9UBU2 259 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 SERTAD3Q9UJW9 196 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 FZD1Q9UP38 647 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 GPR52Q9Y2T5 361 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 PCDHGB3Q9Y5G1 929 aa4.37□□□□□ -1.71
COL4A3BP-205ENST00000508692 PSMD9O00233 223 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 SLC16A3O15427 465 aaKnown RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZSCAN9O15535 394 aaPredicted RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 PPFIA2O75334 1257 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZFPL1O95159 310 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ONECUT2O95948 504 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 C1SP09871 688 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 PECAM1P16284 738 aaPredicted RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 RBL1P28749 1068 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 PTGS2P35354 604 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 TIRAPP58753 221 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 BLOC1S1P78537 153 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 TIAL1Q01085 375 aaKnown RBP eCLIP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 CLCA4Q14CN2 919 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 POSTNQ15063 836 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 TIGD2Q4W5G0 525 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 VPS53Q5VIR6 699 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 LDLRAD3Q86YD5 345 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ARHGEF19Q8IW93 802 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 IZUMO1Q8IYV9 350 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 STT3BQ8TCJ2 826 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 RUBCNQ92622 972 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 LENG9Q96B70 501 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZG16BQ96DA0 208 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 RSPRY1Q96DX4 576 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 PTCD3Q96EY7 689 aaKnown RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 NAF1Q96HR8 494 aaKnown RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZSCAN31Q96LW9 406 aaPredicted RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 TBATAQ96M53 351 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 FAM167BQ9BTA0 163 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 SORBS1Q9BX66 1292 aaKnown RBP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ACTRT3Q9BYD9 372 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZNF69Q9UC07 566 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms