RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 NRG4Q8WWG1 115 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 DVL3Q92997 716 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 IL17RAQ96F46 866 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 ZNF512Q96ME7 567 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 PLIN4Q96Q06 1357 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 UHRF1Q96T88 793 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 NUP88Q99567 741 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 SLF1Q9BQI6 1058 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 NAPBQ9H115 298 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 PRO3102Q9H379 93 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 C11orf49Q9H6J7 331 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 HELLSQ9NRZ9 838 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 FBXO28Q9NVF7 368 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 MTMR4Q9NYA4 1195 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 HECAQ9UBI9 543 aaPredicted RBP4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 CLIP2Q9UDT6 1046 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 NR2E3Q9Y5X4 410 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 MRFAP1Q9Y605 127 aa4.08□□□□□ -1.76
UBE2D3-226ENST00000508635 RLFQ13129 1914 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 GREB1LQ9C091 1923 aaPredicted RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 BAZ2AQ9UIF9 1905 aaKnown RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PFASO15067 1338 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 A0A0D9SFI3 127 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ATP2A1O14983 1001 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 MUSKO15146 869 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 HOXA3O43365 443 aaPredicted RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 NMT2O60551 498 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 NDUFS2O75306 463 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 TTLL1O95922 423 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 CENPBP07199 599 aaPredicted RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PGK2P07205 417 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 TSPY3P0CV98 308 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 TSPY8P0CW00 308 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 FCER1AP12319 257 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 CYBAP13498 195 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 GYPEP15421 78 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 C5AR1P21730 350 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 CYP2C19P33261 490 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PTPN7P35236 360 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 COPB2P35606 906 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 NOVP48745 357 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 GZMKP49863 264 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PER3P56645 1201 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 WNT3AP56704 352 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 APBA1Q02410 837 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ODF1Q14990 250 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ALX1Q15699 326 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 MST1LQ2TV78 715 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ANO4Q32M45 955 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 MCMDC2Q4G0Z9 681 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PRAMEF14Q5SWL7 426 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PRAMEF19Q5SWL8 479 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 MAMDC4Q6UXC1 1216 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 Q6ZVL8 140 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 CENPQQ7L2Z9 268 aaPredicted RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 GMCL1P1Q8NEA9 526 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ZNF480Q8WV37 535 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 STAG1Q8WVM7 1258 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 STON2Q8WXE9 905 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 PGBD4Q96DM1 585 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 CEP95Q96GE4 821 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 TEKT5Q96M29 485 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 FAM227BQ96M60 508 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ENKD1Q9H0I2 346 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 LDAHQ9H6V9 325 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 MSL2Q9HCI7 577 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 IL17RBQ9NRM6 502 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 RBM12Q9NTZ6 932 aaKnown RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 DDX56Q9NY93 547 aaKnown RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 DDX20Q9UHI6 824 aaKnown RBP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 SCOCQ9UIL1 159 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 TUBD1Q9UJT1 453 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ANAPC4Q9UJX5 808 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 INTUQ9ULD6 942 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 RIPK3Q9Y572 518 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 ZNF236Q9UL36 1845 aa4.07□□□□□ -1.76
UBE2D3-226ENST00000508635 TSPY2A6NKD2 308 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 DNM1LO00429 736 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 SEPT4O43236 478 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 ORC4O43929 436 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 RANBP6O60518 1105 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 PLA2G6O60733 806 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 MFAP3LO75121 409 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 ZBED4O75132 1171 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 PHF2O75151 1096 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 FGAP02671 866 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 HSPD1P10809 573 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 HK1P19367 917 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 MCCP23508 829 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 ECHS1P30084 290 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 OAZ1P54368 228 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 EXOSC10Q01780 885 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 MRPL49Q13405 166 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 KCTD2Q14681 263 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 PRKD1Q15139 912 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 CDSNQ15517 529 aa4.06□□□□□ -1.76
UBE2D3-226ENST00000508635 LRRC26Q2I0M4 334 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms