RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CCDC130P13994 396 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 SDHBP21912 280 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 NR2F2P24468 414 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 NR1H3Q13133 447 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 ORC1Q13415 861 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 CSRP2Q16527 193 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 NFIL3Q16649 462 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 PRR23CQ6ZRP0 262 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 ACOT1Q86TX2 421 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 PDZD8Q8NEN9 1154 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 ZMIZ2Q8NF64 920 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 TAF4BQ92750 862 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 ACDQ96AP0 544 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 MED10Q9BTT4 135 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 GOLPH3LQ9H4A5 285 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 FRMD4BQ9Y2L6 1034 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 A0A1W2PQ27 194 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 A0A1W2PQ64 194 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 ANTXRLA6NF34 631 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 COCHO43405 550 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 AP1G2O75843 785 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 BEST1O76090 585 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 ZDHHC11BP0C7U3 371 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 TRIM49P0CI25 452 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 TRIM49CP0CI26 452 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 PIK3CAP42336 1068 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 TUBP50607 506 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 NDST1P52848 882 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 DMC1Q14565 340 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 DHCR24Q15392 516 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 SNX30Q5VWJ9 437 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 KRBA2Q6ZNG9 492 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 UNC93AQ86WB7 457 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 ADGRG2Q8IZP9 1017 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 CRYBG2Q8N1P7 616 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 SLC2A14Q8TDB8 520 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 NETO1Q8TDF5 533 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 USP33Q8TEY7 942 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 SMOQ99835 787 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 CCSER2Q9H7U1 834 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 GMIPQ9P107 970 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 ACACBO00763 2458 aa13.79□□□□□ -0.2
HMGCS1-205ENST00000508319 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 K7EQS6 105 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 SLC9A3R1O14745 358 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 AXIN1O15169 862 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 KIF20AO95235 890 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 APBB3O95704 486 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 VAMP7P51809 220 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 INCA1Q0VD86 236 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 MESP2Q0VG99 397 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 ZCWPW2Q504Y3 356 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 HECTD3Q5T447 861 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 RHBDF2Q6PJF5 856 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 INTS8Q75QN2 995 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 CACNA2D4Q7Z3S7 1137 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 SFTPA1Q8IWL2 248 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 C12orf29Q8N999 325 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 TAS1R2Q8TE23 839 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 LOXL4Q96JB6 756 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 TWNKQ96RR1 684 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 APOBEC3GQ9HC16 384 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 CSNK1G1Q9HCP0 422 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 EBF1Q9UH73 591 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 CHORDC1Q9UHD1 332 aaPredicted RBP13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
HMGCS1-205ENST00000508319 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 SLC30A4O14863 429 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 GDF9O60383 454 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 EPN2O95208 641 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 EIF2DP41214 584 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 GCLMP48507 274 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 PGFP49763 221 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 SEC13P55735 322 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 ENPEPQ07075 957 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 PPP3CAQ08209 521 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 GPRIN1Q7Z2K8 1008 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 FAM186BQ8IYM0 893 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 MYO18AQ92614 2054 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 ZC3H10Q96K80 434 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-205ENST00000508319 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms