RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 A1BGP04217 495 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 XRCC6P12956 609 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC01088-203ENST00000507476 HOXD9P28356 352 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-203ENST00000507476 ARFIP2P53365 341 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 ZNF267Q14586 743 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-203ENST00000507476 MGAT5BQ3V5L5 792 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 ZDHHC17Q8IUH5 632 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 MYO1HQ8N1T3 1032 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.65□□□□□ -1.5
LINC01088-203ENST00000507476 BPIFB1Q8TDL5 484 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 ADAMTS18Q8TE60 1221 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 RSPRY1Q96DX4 576 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 C1GALT1C1Q96EU7 318 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 VCPIP1Q96JH7 1222 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 C17orf80Q9BSJ5 609 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 EBF3Q9H4W6 596 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 AMFRQ9UKV5 643 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 GOLGA6CA6NDK9 693 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 GOLGA6BA6NDN3 693 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 TMEM232C9JQI7 657 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 DSCR3O14972 297 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 GOLGA6DP0CG33 693 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 PF4V1P10720 104 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 PRF1P14222 555 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 NPR1P16066 1061 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 TKTP29401 623 aaKnown RBP5.64□□□□□ -1.51
LINC01088-203ENST00000507476 FGL2Q14314 439 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 RBMS2Q15434 407 aaKnown RBP5.64□□□□□ -1.51
LINC01088-203ENST00000507476 TRIM71Q2Q1W2 868 aaKnown RBP5.64□□□□□ -1.51
LINC01088-203ENST00000507476 PTCHD3Q3KNS1 767 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 PLA1AQ53H76 456 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 WDR78Q5VTH9 848 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 KSR2Q6VAB6 950 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 SFTPA1Q8IWL2 248 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 CHPFQ8IZ52 775 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 SAMD3Q8N6K7 520 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 SIRT6Q8N6T7 355 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 FYTTD1Q96QD9 318 aaKnown RBP5.64□□□□□ -1.51
LINC01088-203ENST00000507476 BRIP1Q9BX63 1249 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 TRIM54Q9BYV2 358 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 CNNM1Q9NRU3 951 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 PIH1D1Q9NWS0 290 aaKnown RBP5.64□□□□□ -1.51
LINC01088-203ENST00000507476 GOLGA6AQ9NYA3 693 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 TFCP2L1Q9NZI6 479 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 IP6K2Q9UHH9 426 aa5.64□□□□□ -1.51
LINC01088-203ENST00000507476 FER1L4A9Z1Z3 1794 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 VCAM1P19320 739 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 GKP32189 559 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 PRKAG1P54619 331 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 HTRA4P83105 476 aaPredicted RBP5.63□□□□□ -1.51
LINC01088-203ENST00000507476 SETQ01105 290 aaPredicted RBP5.63□□□□□ -1.51
LINC01088-203ENST00000507476 CTBP1Q13363 440 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 MLC1Q15049 377 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 NFE2Q16621 373 aaPredicted RBP5.63□□□□□ -1.51
LINC01088-203ENST00000507476 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 SYCP2LQ5T4T6 812 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 C10orf25Q5T742 122 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 DIS3LQ8TF46 1054 aaKnown RBP5.63□□□□□ -1.51
LINC01088-203ENST00000507476 PPP2R3CQ969Q6 453 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 NT5C1BQ96P26 610 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 GBA2Q9HCG7 927 aaPredicted RBP5.63□□□□□ -1.51
LINC01088-203ENST00000507476 AASDHPPTQ9NRN7 309 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 LPAR3Q9UBY5 353 aa5.63□□□□□ -1.51
LINC01088-203ENST00000507476 CCDC189A1A4V9 331 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 MYMKA6NI61 221 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 TMEM233B4DJY2 109 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 BTBD19C9JJ37 291 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 H3BNC9 293 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 PMPCBO75439 489 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 GCATO75600 419 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 OFD1O75665 1012 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 SCGB1D2O95969 90 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 NEK2P51955 445 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 GPR162Q16538 588 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 LMBRD2Q68DH5 695 aaPredicted RBP5.62□□□□□ -1.51
LINC01088-203ENST00000507476 C11orf96Q7Z7L8 435 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 RAVER1Q8IY67 606 aaKnown RBP5.62□□□□□ -1.51
LINC01088-203ENST00000507476 KBTBD7Q8WVZ9 684 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 RAPGEF4Q8WZA2 1011 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 ADGRE3Q9BY15 652 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 DPH1Q9BZG8 443 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 MS4A7Q9GZW8 240 aaPredicted RBP5.62□□□□□ -1.51
LINC01088-203ENST00000507476 PNMA2Q9UL42 364 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 ANKRD6Q9Y2G4 727 aa5.62□□□□□ -1.51
LINC01088-203ENST00000507476 BTN3A1O00481 513 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 CES2O00748 559 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 MT-CO3P00414 261 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 HSP90AA1P07900 732 aaKnown RBP5.61□□□□□ -1.51
LINC01088-203ENST00000507476 APEHP13798 732 aaKnown RBP5.61□□□□□ -1.51
LINC01088-203ENST00000507476 GHRHRQ02643 423 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 LMAN2Q12907 356 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 DHX8Q14562 1220 aaKnown RBP5.61□□□□□ -1.51
LINC01088-203ENST00000507476 TWIST1Q15672 202 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 CERCAMQ5T4B2 595 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 IFIT1BQ5T764 474 aaKnown RBP5.61□□□□□ -1.51
LINC01088-203ENST00000507476 ZNF783Q6ZMS7 281 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 PIP4P1Q86T03 277 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 PPM1EQ8WY54 764 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 CTHRC1Q96CG8 243 aa5.61□□□□□ -1.51
LINC01088-203ENST00000507476 HOOK2Q96ED9 719 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms