RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 ODF2Q5BJF6 829 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 RAB41Q5JT25 222 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 FAM117BQ6P1L5 589 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 SPOCD1Q6ZMY3 1216 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 TMEM173Q86WV6 379 aaPredicted RBP13.21□□□□□ -0.29
SIL1-209ENST00000507002 ZDHHC14Q8IZN3 488 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 PRELID2Q8N945 189 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 HDAC7Q8WUI4 952 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 MAIP1Q8WWC4 291 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
SIL1-209ENST00000507002 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 ACSF2Q96CM8 615 aaPredicted RBP13.21□□□□□ -0.29
SIL1-209ENST00000507002 B3GALT6Q96L58 329 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 SLITRK1Q96PX8 696 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 NCAPGQ9BPX3 1015 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
SIL1-209ENST00000507002 OSBPL8Q9BZF1 889 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 SLITRK6Q9H5Y7 841 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.29
SIL1-209ENST00000507002 CNGB3Q9NQW8 809 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 ARGLU1Q9NWB6 273 aaPredicted RBP13.21□□□□□ -0.29
SIL1-209ENST00000507002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.21□□□□□ -0.29
SIL1-209ENST00000507002 PCSK1NQ9UHG2 260 aa13.21□□□□□ -0.29
SIL1-209ENST00000507002 BRCA2P51587 3418 aa13.21□□□□□ -0.3
SIL1-209ENST00000507002 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 LRRD1A4D1F6 860 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 H7C4K7 107 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RAD51CO43502 376 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 PHF2O75151 1096 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 TRUB2O95900 331 aaKnown RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 GLI1P08151 1106 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RARAP10276 462 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RALAP11233 206 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 ALDH7A1P49419 539 aaKnown RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 DAOAP59103 153 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 COPS2P61201 443 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 VSNL1P62760 191 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 BRD3Q15059 726 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 SMTNL2Q2TAL5 461 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RAB6CQ53S08 254 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 WDR93Q6P2C0 686 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 MFSD7Q6UXD7 560 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 TMCO2Q7Z6W1 182 aaPredicted RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RAPGEF5Q92565 580 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RUBCNQ92622 972 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 ZNF689Q96CS4 500 aaPredicted RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 PEBP4Q96S96 227 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RAB6CQ9H0N0 254 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 RC3H2Q9HBD1 1191 aaKnown RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 ABI2Q9NYB9 513 aaPredicted RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 DMGDHQ9UI17 866 aaKnown RBP13.2□□□□□ -0.3
SIL1-209ENST00000507002 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
SIL1-209ENST00000507002 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 HEXIM1O94992 359 aaKnown RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 CYP2F1P24903 491 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 MCM3P25205 808 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 PTPN7P35236 360 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 MATKP42679 507 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 CLCN6P51797 869 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 YWHAZP63104 245 aaKnown RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
SIL1-209ENST00000507002 CYP1B1Q16678 543 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 RTP2Q5QGT7 225 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 SPOUT1Q5T280 376 aaKnown RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 CYP4V2Q6ZWL3 525 aaPredicted RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 ANKS1BQ7Z6G8 1248 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 CENPIQ92674 756 aaPredicted RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 FUBP3Q96I24 572 aaKnown RBP eCLIP13.19□□□□□ -0.3
SIL1-209ENST00000507002 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 ZNF558Q96NG5 402 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 C11orf84Q9BUA3 381 aaPredicted RBP13.19□□□□□ -0.3
SIL1-209ENST00000507002 HEMGNQ9BXL5 484 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.19□□□□□ -0.3
SIL1-209ENST00000507002 STIM2Q9P246 746 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 PCDHB5Q9Y5E4 795 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
SIL1-209ENST00000507002 hCG_1818297A0A087WSY0 165 aa13.18□□□□□ -0.3
SIL1-209ENST00000507002 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
SIL1-209ENST00000507002 C3orf70A6NLC5 250 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms