RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 ADORA2AP29274 412 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 PTGER1P34995 402 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 PDE6CP51160 858 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 TPTEP56180 551 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 HOXA4Q00056 320 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 SATB1Q01826 763 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 HDAC1Q13547 482 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 CNGA2Q16280 664 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 LONRF1Q17RB8 773 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 FCRL6Q6DN72 434 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 IL31Q6EBC2 164 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 CYB5RLQ6IPT4 315 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 KIRREL2Q6UWL6 708 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 TRIM72Q6ZMU5 477 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 SLC15A3Q8IY34 581 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 SLC15A4Q8N697 577 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 DNAJC5GQ8N7S2 189 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 PNLDC1Q8NA58 520 aaKnown RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 XAGE5Q8WWM1 108 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 APIPQ96GX9 242 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 RITA1Q96K30 269 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 ZNF48Q96MX3 618 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 THAP7Q9BT49 309 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-206ENST00000506960 NRIP3Q9NQ35 241 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 GABRQQ9UN88 632 aa4.28□□□□□ -1.72
SSBP2-206ENST00000506960 A0A087WWL8 130 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 KPNA5O15131 536 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 THP07101 528 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 IFIT2P09913 472 aaKnown RBP4.27□□□□□ -1.73
SSBP2-206ENST00000506960 PHKG2P15735 406 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 TKTP29401 623 aaKnown RBP4.27□□□□□ -1.73
SSBP2-206ENST00000506960 LRPAP1P30533 357 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 NEK3P51956 506 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 ARFIP2P53365 341 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 BRD3Q15059 726 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 CYP1B1Q16678 543 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 LY6KQ17RY6 165 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 C3orf38Q5JPI3 329 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 DPY19L3Q6ZPD9 716 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 CATSPERGQ6ZRH7 1159 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 CCDC33Q8N5R6 958 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 C8orf58Q8NAV2 365 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 PARD3BQ8TEW8 1205 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 OSCP1Q8WVF1 389 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 C5orf34Q96MH7 638 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 LENG8Q96PV6 779 aaPredicted RBP4.27□□□□□ -1.73
SSBP2-206ENST00000506960 BTBD1Q9H0C5 482 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 PNPLA8Q9NP80 782 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 PDGFCQ9NRA1 345 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
SSBP2-206ENST00000506960 PAXBP1Q9Y5B6 917 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 SNX14Q9Y5W7 946 aa4.27□□□□□ -1.73
SSBP2-206ENST00000506960 SMIM35A0A1B0GVV1 85 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 ANO9A1A5B4 782 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 H7C1Q1 480 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 MOSPD3O75425 235 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 TOP3BO95985 862 aaKnown RBP4.26□□□□□ -1.73
SSBP2-206ENST00000506960 CYP2C9P11712 490 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 KCNA3P22001 575 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 FPR3P25089 353 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 ARHGAP25P42331 645 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 DGKEP52429 567 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 WNT3P56703 355 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 RPS16P62249 146 aaKnown RBP4.26□□□□□ -1.73
SSBP2-206ENST00000506960 KRT17Q04695 432 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 CTBP1Q13363 440 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 KRTAP27-1Q3LI81 207 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 SYCP2LQ5T4T6 812 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 GAS2L3Q86XJ1 694 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 LIX1LQ8IVB5 337 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 ABRAQ8N0Z2 381 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 KRT78Q8N1N4 520 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 GALNT16Q8N428 558 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 DAZAP1Q96EP5 407 aaKnown RBP4.26□□□□□ -1.73
SSBP2-206ENST00000506960 ASB2Q96Q27 587 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 STK31Q9BXU1 1019 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 ZNF518BQ9C0D4 1074 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 MS4A7Q9GZW8 240 aaPredicted RBP4.26□□□□□ -1.73
SSBP2-206ENST00000506960 STK32BQ9NY57 414 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 HDAC9Q9UKV0 1011 aa4.26□□□□□ -1.73
SSBP2-206ENST00000506960 TRIM43BA6NCK2 446 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 TMEM233B4DJY2 109 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 FOXN3O00409 490 aaPredicted RBP4.25□□□□□ -1.73
SSBP2-206ENST00000506960 EXOC3O60645 756 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 RASSF9O75901 435 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 XRCC6P12956 609 aaKnown RBP eCLIP4.25□□□□□ -1.73
SSBP2-206ENST00000506960 RPL17P18621 184 aaKnown RBP4.25□□□□□ -1.73
SSBP2-206ENST00000506960 FMO1Q01740 532 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 L1TD1Q5T7N2 865 aaKnown RBP4.25□□□□□ -1.73
SSBP2-206ENST00000506960 DCAF12L1Q5VU92 463 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 SLC9A4Q6AI14 798 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 C11orf96Q7Z7L8 435 aa4.25□□□□□ -1.73
SSBP2-206ENST00000506960 CAND1Q86VP6 1230 aaKnown RBP4.25□□□□□ -1.73
SSBP2-206ENST00000506960 TERB1Q8NA31 727 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms