RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 FBXO4Q9UKT5 387 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 CPQQ9Y646 472 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 WNT6Q9Y6F9 365 aa16.47■□□□□ 0.23
CLDND1-211ENST00000506575 MYO15AQ9UKN7 3530 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 LEFTY2O00292 366 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 P4HA2O15460 535 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 OLFM2O95897 454 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 SP9P0CG40 484 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 CCDC192P0DO97 292 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 CHRNB1P11230 501 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
CLDND1-211ENST00000506575 SLC8A3P57103 927 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 CSTF1Q05048 431 aaKnown RBP16.46■□□□□ 0.23
CLDND1-211ENST00000506575 MTAPQ13126 283 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 NR1H3Q13133 447 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 DGKKQ5KSL6 1271 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 ZC3H14Q6PJT7 736 aaKnown RBP16.46■□□□□ 0.23
CLDND1-211ENST00000506575 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 NT5C1BQ96P26 610 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 DUSP16Q9BY84 665 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 CLSTN2Q9H4D0 955 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 ECT2Q9H8V3 914 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 PNPLA8Q9NP80 782 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
CLDND1-211ENST00000506575 SMPD4Q9NXE4 827 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.23
CLDND1-211ENST00000506575 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLDND1-211ENST00000506575 FAM92AA1XBS5 289 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 PROB1E7EW31 1015 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 PMM2O15305 246 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 NFATC1O95644 943 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 TUBP50607 506 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 RAD23BP54727 409 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLDND1-211ENST00000506575 PPP2R5DQ14738 602 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 ZNF528Q3MIS6 628 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 SNX30Q5VWJ9 437 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 TRIM59Q8IWR1 403 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 NKD2Q969F2 451 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-211ENST00000506575 CCSER2Q9H7U1 834 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 CFAP97Q9P2B7 532 aa16.45■□□□□ 0.22
CLDND1-211ENST00000506575 VPS13AQ96RL7 3174 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 OTOL1A6NHN0 477 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-211ENST00000506575 SLC9A3R1O14745 358 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-211ENST00000506575 COCHO43405 550 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 GFRA3O60609 400 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 AFPP02771 609 aaKnown RBP16.44■□□□□ 0.22
CLDND1-211ENST00000506575 ZDHHC11BP0C7U3 371 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 CCR3P51677 355 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 MARSP56192 900 aaKnown RBP16.44■□□□□ 0.22
CLDND1-211ENST00000506575 ZXDBP98169 803 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 EML3Q32P44 896 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 GPRIN1Q7Z2K8 1008 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 CREBRFQ8IUR6 639 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 MAML2Q8IZL2 1156 aaPredicted RBP16.44■□□□□ 0.22
CLDND1-211ENST00000506575 PPM1KQ8N3J5 372 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 SYNPOQ8N3V7 929 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 KIAA1958Q8N8K9 716 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 MLKLQ8NB16 471 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 LINC00597Q9H2U6 94 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
CLDND1-211ENST00000506575 SCML2Q9UQR0 700 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 R4GN57 208 aa16.44■□□□□ 0.22
CLDND1-211ENST00000506575 RIF1Q5UIP0 2472 aaKnown RBP16.43■□□□□ 0.22
CLDND1-211ENST00000506575 USP34Q70CQ2 3546 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 DMDP11532 3685 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 WDR87Q6ZQQ6 2873 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 HHLA1C9JL84 531 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 CYP26A1O43174 497 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 TLR5O60602 858 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 CD19P15391 556 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 GJA4P35212 333 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 TPD52L1Q16890 204 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-211ENST00000506575 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 ARHGAP17Q68EM7 881 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 SPEM1Q8N4L4 309 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 P2RY13Q9BPV8 354 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 SEMA4AQ9H3S1 761 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 PRMT8Q9NR22 394 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-211ENST00000506575 HESX1Q9UBX0 185 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 FANCMQ8IYD8 2048 aa16.43■□□□□ 0.22
CLDND1-211ENST00000506575 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
CLDND1-211ENST00000506575 CXCL12P48061 93 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 KIF11P52732 1056 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 CCINQ13939 588 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 TMEM196Q5HYL7 178 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 TMEM270Q6UE05 265 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 MAMSTRQ6ZN01 415 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 ANKRD52Q8NB46 1076 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 EHBP1Q8NDI1 1231 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 ATRIPQ8WXE1 791 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
CLDND1-211ENST00000506575 UBXN6Q9BZV1 441 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 TBC1D14Q9P2M4 693 aa16.42■□□□□ 0.22
CLDND1-211ENST00000506575 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms