RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 RNF38Q9H0F5 515 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 FBXO44Q9H4M3 255 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 TDP1Q9NUW8 608 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 WNT16Q9UBV4 365 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 FBXL21Q9UKT6 434 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 CA14Q9ULX7 337 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 SCML2Q9UQR0 700 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 USP3Q9Y6I4 520 aa19.25■□□□□ 0.67
PDLIM7-216ENST00000506537 TICRRQ7Z2Z1 1910 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 LRRC10BA6NIK2 292 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 ARNTLO00327 626 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 DPYSL4O14531 572 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 XPO1O14980 1071 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 ABL1P00519 1130 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 USP17L7P0C7H9 530 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 GDI1P31150 447 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 ZXDBP98169 803 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 USP4Q13107 963 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 CNGA2Q16280 664 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 RAB41Q5JT25 222 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 SNX30Q5VWJ9 437 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 BMP8AQ7Z5Y6 402 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 SIX5Q8N196 739 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 UBXN6Q9BZV1 441 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 GANQ9H2C0 597 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 OSER1Q9NX31 292 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 HESX1Q9UBX0 185 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 SIK3Q9Y2K2 1263 aa19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 ARIH1Q9Y4X5 557 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-216ENST00000506537 M0QYV0 167 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 SETSIPP0DME0 302 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 PFKLP17858 780 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 HDCP19113 662 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 CDK11BP21127 795 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 USP8P40818 1118 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 PLA2G4AP47712 749 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 ZNF77Q15935 545 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 BPIFB1Q8TDL5 484 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 SECISBP2LQ93073 1101 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 PBXIP1Q96AQ6 731 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 ZFYVE19Q96K21 471 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 CCSER2Q9H7U1 834 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 BRD9Q9H8M2 597 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 KIF9Q9HAQ2 790 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 NMUR1Q9HB89 426 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 CBX8Q9HC52 389 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 ARHGEF3Q9NR81 526 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 ARHGAP26Q9UNA1 814 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 HCN4Q9Y3Q4 1203 aa19.23■□□□□ 0.67
PDLIM7-216ENST00000506537 SMTNL1A8MU46 457 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 FOXN3O00409 490 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 EPHB6O15197 1021 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 CHADO15335 359 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 COCHO43405 550 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 GABBR2O75899 941 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 TPM2P07951 284 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 UCHL3P15374 230 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 GNA15P30679 374 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 SLC7A9P82251 487 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 STILQ15468 1287 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 FKBP15Q5T1M5 1219 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 CWF19L1Q69YN2 538 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 CCDC186Q7Z3E2 898 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 SCD5Q86SK9 330 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 ANKRD20A12PQ8NF67 263 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 SLC35F5Q8WV83 523 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 DNASE1L2Q92874 299 aa19.22■□□□□ 0.67
PDLIM7-216ENST00000506537 ZDBF2Q9HCK1 2354 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 A0A1W2PQH9 124 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 SHISA7A6NL88 538 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 ZNF263O14978 683 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 TUBP50607 506 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 PDE6CP51160 858 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 TKTL1P51854 596 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 SLC8A3P57103 927 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 PFKPQ01813 784 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 RAPGEF1Q13905 1077 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 DRAP1Q14919 205 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 SYCP1Q15431 976 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 MLF2Q15773 248 aaPredicted RBP19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 HECTD3Q5T447 861 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 PMF1Q6P1K2 205 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 DENND1BQ6P3S1 775 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 BHLHA9Q7RTU4 235 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 LUZP1Q86V48 1076 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 YAF2Q8IY57 180 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 FAM71AQ8IYT1 594 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 KMT2EQ8IZD2 1858 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 SH3RF2Q8TEC5 729 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 ZNF606Q8WXB4 792 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 IRF7Q92985 503 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 ZFRQ96KR1 1074 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 ULBP1Q9BZM6 244 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 TLR8Q9NR97 1041 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 HEBP1Q9NRV9 189 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 CPQQ9Y646 472 aa19.21■□□□□ 0.67
PDLIM7-216ENST00000506537 THAP12O43422 761 aa19.2■□□□□ 0.66
PDLIM7-216ENST00000506537 TCF3P15923 654 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms