RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 CNOT8Q9UFF9 292 aaKnown RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 SLC27A5Q9Y2P5 690 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 PCDHGC5Q9Y5F6 944 aa7.58□□□□□ -1.2
NUP54-204ENST00000506098 MYO18AQ92614 2054 aaKnown RBP7.58□□□□□ -1.2
NUP54-204ENST00000506098 ANKRD36A6QL64 1941 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 A0A0U1RQJ8 604 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 GOLGA6L9A6NEM1 432 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 PAPSS1O43252 624 aaPredicted RBP7.57□□□□□ -1.2
NUP54-204ENST00000506098 GLUD1P00367 558 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ABL1P00519 1130 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 GLI1P08151 1106 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 POU2F2P09086 479 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ABCB4P21439 1286 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 RRM1P23921 792 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 HOXA9P31269 272 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ELF1P32519 619 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 GPR15P49685 360 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TKTL1P51854 596 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SLC5A3P53794 718 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 DAOAP59103 153 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 MRPS5P82675 430 aaKnown RBP7.57□□□□□ -1.2
NUP54-204ENST00000506098 SLC6A3Q01959 620 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ADIGQ0VDE8 80 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 KIF5AQ12840 1032 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 PLD1Q13393 1074 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 MAMLD1Q13495 774 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 PTPROQ16827 1216 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 DUSP6Q16828 381 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 DDR2Q16832 855 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 MGAT5BQ3V5L5 792 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 EFHC1Q5JVL4 640 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 OLFML1Q6UWY5 402 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TMEM184AQ6ZMB5 413 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 CCDC149Q6ZUS6 474 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 DENND5BQ6ZUT9 1274 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 FAM183BPQ6ZVS7 135 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 BEND5Q7L4P6 421 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SLC26A9Q7LBE3 791 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 BHLHA9Q7RTU4 235 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 GPRIN1Q7Z2K8 1008 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ADGRD2Q7Z7M1 963 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ZSCAN30Q86W11 494 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SCN4BQ8IWT1 228 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 RNF10Q8N5U6 811 aaKnown RBP7.57□□□□□ -1.2
NUP54-204ENST00000506098 KREMEN2Q8NCW0 462 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SLC35G2Q8TBE7 412 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 MICAL1Q8TDZ2 1067 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ATRIPQ8WXE1 791 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 RFFLQ8WZ73 363 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 IRGQQ8WZA9 623 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 KHSRPQ92945 711 aaKnown RBP eCLIP7.57□□□□□ -1.27e-7■■■□□ 17.1
NUP54-204ENST00000506098 ZNF653Q96CK0 615 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ARHGEF26Q96DR7 871 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TRMT2BQ96GJ1 504 aaKnown RBP7.57□□□□□ -1.2
NUP54-204ENST00000506098 MYRFLQ96LU7 910 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TTYH1Q9H313 450 aaPredicted RBP7.57□□□□□ -1.2
NUP54-204ENST00000506098 FBXO44Q9H4M3 255 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 CYP4F11Q9HBI6 524 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 MRPL47Q9HD33 250 aaKnown RBP7.57□□□□□ -1.2
NUP54-204ENST00000506098 ST7Q9NRC1 585 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 PARVAQ9NVD7 372 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 EHD2Q9NZN4 543 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 DPP7Q9UHL4 492 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TMEM59LQ9UK28 342 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TFR2Q9UP52 801 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SCML2Q9UQR0 700 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 YIPF1Q9Y548 306 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 ASB3Q9Y575 518 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 INSL5Q9Y5Q6 135 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 SCINQ9Y6U3 715 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 DUSP10Q9Y6W6 482 aa7.57□□□□□ -1.2
NUP54-204ENST00000506098 TMEM191CA6NGB0 347 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 SLC38A8A6NNN8 435 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 USP27XA6NNY8 438 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 RFXAPO00287 272 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 PRRG1O14668 218 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 SART1O43290 800 aaKnown RBP7.56□□□□□ -1.2
NUP54-204ENST00000506098 ATMINO43313 823 aaPredicted RBP7.56□□□□□ -1.2
NUP54-204ENST00000506098 ZMYND10O75800 440 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 SOAT2O75908 522 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 ZBED1O96006 694 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 ZDHHC11BP0C7U3 371 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 CSH1P0DML2 217 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 CSH2P0DML3 217 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 LCP1P13796 627 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 HMGA1P17096 107 aaKnown RBP7.56□□□□□ -1.2
NUP54-204ENST00000506098 YWHAQP27348 245 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 CA8P35219 290 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 ALDH1A3P47895 512 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 CDR1P51861 262 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 EPHB3P54753 998 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 C2CD6Q53TS8 623 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 CYP4A22Q5TCH4 519 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 SNX30Q5VWJ9 437 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 OR6B2Q6IFH4 312 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 GPR153Q6NV75 609 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 SIX6OS1Q8N1H7 587 aa7.56□□□□□ -1.2
NUP54-204ENST00000506098 ZNF276Q8N554 614 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms