RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SPARTQ8N0X7 666 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 SMCR8Q8TEV9 937 aaPredicted RBP6.82□□□□□ -1.32
NIPBL-205ENST00000505998 IQCDQ96DY2 449 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 ALG8Q9BVK2 526 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 ZNF212Q9UDV6 495 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 PIK3C2BO00750 1634 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 SPATA31D1Q6ZQQ2 1576 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 NEURL4Q96JN8 1562 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 SPHKAPQ2M3C7 1700 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 ZNF142P52746 1687 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-205ENST00000505998 PREX1Q8TCU6 1659 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 PZPP20742 1482 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 A0A087X1B8 175 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 H7C4K7 107 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 RAB27BO00194 218 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 ORC4O43929 436 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 TLR5O60602 858 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 INMTO95050 263 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 ACVR2AP27037 513 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 AK2P54819 239 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 HTRA4P83105 476 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-205ENST00000505998 HDAC1Q13547 482 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-205ENST00000505998 ARHGEF7Q14155 803 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 RNF44Q7L0R7 432 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 ATRIPQ8WXE1 791 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 ATG4AQ8WYN0 398 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 PBKQ96KB5 322 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 EHD3Q9NZN3 535 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 RGS17Q9UGC6 210 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-205ENST00000505998 CDY1Q9Y6F8 540 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 SETD5Q9C0A6 1442 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 CNTLNQ9NXG0 1405 aa6.81□□□□□ -1.32
NIPBL-205ENST00000505998 SALL3Q9BXA9 1300 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 CCDC151A5D8V7 595 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 VWC2LB2RUY7 222 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 ADM5C9JUS6 153 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 SLC16A3O15427 465 aaKnown RBP6.8□□□□□ -1.32
NIPBL-205ENST00000505998 THAP12O43422 761 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 RGS10O43665 173 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 RASAL1O95294 804 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 TSHRP16473 764 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 IL1R2P27930 398 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 PLA2G5P39877 138 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 PTDSS1P48651 473 aaKnown RBP6.8□□□□□ -1.32
NIPBL-205ENST00000505998 SP2Q02086 613 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 DEPDC1Q5TB30 811 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 KLHDC7AQ5VTJ3 777 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 DPP9Q86TI2 863 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 ATP11CQ8NB49 1132 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 SVIPQ8NHG7 77 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 ZC3H10Q96K80 434 aaKnown RBP6.8□□□□□ -1.32
NIPBL-205ENST00000505998 SORCS2Q96PQ0 1159 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 MYD88Q99836 296 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 DHX36Q9H2U1 1008 aaKnown RBP6.8□□□□□ -1.32
NIPBL-205ENST00000505998 STARD7Q9NQZ5 370 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 TRMT13Q9NUP7 481 aaKnown RBP6.8□□□□□ -1.32
NIPBL-205ENST00000505998 TBC1D23Q9NUY8 699 aa6.8□□□□□ -1.32
NIPBL-205ENST00000505998 SETD1BQ9UPS6 1966 aaKnown RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 WDR27A2RRH5 827 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 CSF1RP07333 972 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 IFIT2P09913 472 aaKnown RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 NR2F6P10588 404 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 TPH1P17752 444 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 BTF3P20290 206 aaKnown RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 ADORA2AP29274 412 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 CXCR5P32302 372 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 TM4SF4P48230 202 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 CPT1AP50416 773 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 ITGA8P53708 1063 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 MAPK10P53779 464 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 ZNF169Q14929 603 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 ERCC6LQ2NKX8 1250 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 PTCHD3Q3KNS1 767 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 SYCP2LQ5T4T6 812 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 ZNF618Q5T7W0 954 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 KCTD20Q7Z5Y7 419 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 PEG10Q86TG7 708 aaKnown RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 TMEM171Q8WVE6 324 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 OSCP1Q8WVF1 389 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 CHFRQ96EP1 664 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 CCDC138Q96M89 665 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 GLOD4Q9HC38 313 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 GBA2Q9HCG7 927 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 DNMT3BQ9UBC3 853 aaKnown RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 DKK3Q9UBP4 350 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 PADI4Q9UM07 663 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
NIPBL-205ENST00000505998 RIMS1Q86UR5 1692 aaKnown RBP6.79□□□□□ -1.32
NIPBL-205ENST00000505998 WDR33Q9C0J8 1336 aaKnown RBP6.78□□□□□ -1.32
NIPBL-205ENST00000505998 TRPM2O94759 1503 aa6.78□□□□□ -1.32
NIPBL-205ENST00000505998 RASA4BC9J798 803 aa6.78□□□□□ -1.32
NIPBL-205ENST00000505998 APOL1O14791 398 aa6.78□□□□□ -1.32
NIPBL-205ENST00000505998 RASA4O43374 803 aa6.78□□□□□ -1.32
NIPBL-205ENST00000505998 RRP9O43818 475 aaKnown RBP6.78□□□□□ -1.32
NIPBL-205ENST00000505998 SRGAP2O75044 1071 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms