RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 ZBTB5O15062 677 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 PDGFRBP09619 1106 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 PSMC2P35998 433 aaKnown RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 PDIA2Q13087 525 aaKnown RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 KLF1Q13351 362 aaPredicted RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 ITGA7Q13683 1181 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 CCNG2Q16589 344 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 TBC1D10BQ4KMP7 808 aaPredicted RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 GJC2Q5T442 439 aaPredicted RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 LLGL2Q6P1M3 1020 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 PYROXD1Q8WU10 500 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 MRRFQ96E11 262 aaKnown RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 DHRS4Q9BTZ2 278 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 SERPINA10Q9UK55 444 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 GTF3C4Q9UKN8 822 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 RAB26Q9ULW5 256 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 PCDHA12Q9UN75 941 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 ARFGEF1Q9Y6D6 1849 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 LRRC37AA6NMS7 1700 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 CCDC162PA2VCL2 907 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 DNALI1O14645 258 aaPredicted RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 KLF11O14901 512 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 ALOX15BO15296 676 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 TGFB1I1O43294 461 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 ITM2AO43736 263 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 BGNP21810 368 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 CDK9P50750 372 aaKnown RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 ZNF200P98182 395 aaPredicted RBP13.82□□□□□ -0.2
LETM1-203ENST00000505551 BTKQ06187 659 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 NFIL3Q16649 462 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 ELMSAN1Q6PJG2 1045 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 LZTR1Q8N653 840 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 SCAIQ8N9R8 606 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 ETNPPLQ8TBG4 499 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 DCUN1D1Q96GG9 259 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 REEP2Q9BRK0 252 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 TCHPQ9BT92 498 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
LETM1-203ENST00000505551 IGSF5Q9NSI5 407 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 CNTN3Q9P232 1028 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 STRIP2Q9ULQ0 834 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 TMCC3Q9ULS5 477 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 INPP5FQ9Y2H2 1132 aa13.82□□□□□ -0.2
LETM1-203ENST00000505551 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 FUOMA2VDF0 154 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 H3BNX3 289 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 RAG1P15918 1043 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 HOXA13P31271 388 aaPredicted RBP13.81□□□□□ -0.2
LETM1-203ENST00000505551 RXRGP48443 463 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ENTPD1P49961 510 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 PGM2L1Q6PCE3 622 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ADGRD1Q6QNK2 874 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ISLR2Q6UXK2 745 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ACER1Q8TDN7 264 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 IDI2Q9BXS1 227 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 MAD1L1Q9Y6D9 718 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 SF3B1O75533 1304 aaKnown RBP eCLIP13.81□□□□□ -0.2
LETM1-203ENST00000505551 PCNTO95613 3336 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 hCG_1984214I3L0E3 225 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 NDUFB10O96000 172 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ATP5BP06576 529 aaKnown RBP13.81□□□□□ -0.2
LETM1-203ENST00000505551 PHKA2P46019 1235 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 STT3AP46977 705 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 NOP14P78316 857 aaKnown RBP13.81□□□□□ -0.2
LETM1-203ENST00000505551 MYL7Q01449 175 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 GPR162Q16538 588 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ZNF423Q2M1K9 1284 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 PPM1KQ8N3J5 372 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 ZNF713Q8N859 430 aaPredicted RBP13.81□□□□□ -0.2
LETM1-203ENST00000505551 LMO3Q8TAP4 145 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 CCDC17Q96LX7 622 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 COQ6Q9Y2Z9 468 aa13.81□□□□□ -0.2
LETM1-203ENST00000505551 MYPNQ86TC9 1320 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 CRTAMO95727 393 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 CDK18Q07002 472 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
LETM1-203ENST00000505551 PAOXQ6QHF9 649 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 PRPF18Q99633 342 aaKnown RBP13.8□□□□□ -0.2
LETM1-203ENST00000505551 RUSC1Q9BVN2 902 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 WWP1Q9H0M0 922 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 RRN3Q9NYV6 651 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 RABGEF1Q9UJ41 708 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 HEMK1Q9Y5R4 338 aaPredicted RBP13.8□□□□□ -0.2
LETM1-203ENST00000505551 ARHGAP42A6NI28 874 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 MEI4A8MW99 385 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 PRR5-ARHGAP8B1AHC4 643 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 SPTLC1O15269 473 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 MED24O75448 989 aa13.8□□□□□ -0.2
LETM1-203ENST00000505551 RBP3P10745 1247 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms