RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 CHD2O14647 1828 aaKnown RBP4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 DIP2AQ14689 1571 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 NWD1Q149M9 1564 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ADGRF5Q8IZF2 1346 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CPS1P31327 1500 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 LRRC7Q96NW7 1537 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 TCRBV7S2A1N4TA0A589 114 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 B4E171 279 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 FOXN3O00409 490 aaPredicted RBP4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 KIAA0391O15091 583 aaKnown RBP4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 IRAK2O43187 625 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 UBXN7O94888 489 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CFIP05156 583 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 XBP1P17861 261 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 BMPR1AP36894 532 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 UBA7P41226 1012 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PIK3CBP42338 1070 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 WASP42768 502 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 KRT83P78385 493 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 KIF23Q02241 960 aaPredicted RBP4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 COL10A1Q03692 680 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 OCA2Q04671 838 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 RESTQ13127 1097 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PRKG1Q13976 671 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 STARD3Q14849 445 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 UBXN2BQ14CS0 331 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PLCB4Q15147 1175 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 C3orf36Q3SXR2 165 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 Q6YL49 198 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 USP45Q70EL2 814 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 MAPKAPK5Q8IW41 473 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 LMNTD2Q8IXW0 634 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SYTL1Q8IYJ3 562 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ZNF527Q8NB42 609 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 AFAP1L1Q8TED9 768 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 LRTOMTQ8WZ04 291 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 TMEM41AQ96HV5 264 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 TMEM120AQ9BXJ8 343 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 BRD9Q9H8M2 597 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 UBN1Q9NPG3 1134 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 WASH6PQ9NQA3 447 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ODF2LQ9ULJ1 636 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 LIMCH1Q9UPQ0 1083 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PCDHA13Q9Y5I0 950 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 NRXN1Q9ULB1 1477 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ALKQ9UM73 1620 aa4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 XIRP1Q702N8 1843 aaKnown RBP4.79□□□□□ -1.64
PDLIM1P4-201ENST00000504327 AATKQ6ZMQ8 1374 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 MYOM2P54296 1465 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 IQSEC2Q5JU85 1478 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SYNDIG1LA6NDD5 238 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 TTC36A6NLP5 189 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 KPNA5O15131 536 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 HTRA2O43464 458 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SKAP2O75563 359 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SPDEFO95238 335 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 HLA-DOAP06340 250 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 RPL17P18621 184 aaKnown RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 FGFR4P22455 802 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PROZP22891 400 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 GCSHP23434 173 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 GALNSP34059 522 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CASP5P51878 434 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SLC16A1P53985 500 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ATXN1P54253 815 aaKnown RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 GUCY1B3Q02153 619 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 GRM1Q13255 1194 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 IL10RAQ13651 578 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 POLD3Q15054 466 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CNN3Q15417 329 aaKnown RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ANO6Q4KMQ2 910 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SLC45A4Q5BKX6 768 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 FAM209BQ5JX69 171 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 MFSD4BQ5TF39 518 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 HECTD2Q5U5R9 776 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CCDC30Q5VVM6 783 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 NPNTQ6UXI9 565 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ASB10Q8WXI3 467 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 CENPIQ92674 756 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PHKBQ93100 1093 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 VMP1Q96GC9 406 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ZMAT2Q96NC0 199 aaKnown RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 TREX2Q9BQ50 279 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 REXO4Q9GZR2 422 aaKnown RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 BTBD1Q9H0C5 482 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 ITM2CQ9NQX7 267 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 TDP1Q9NUW8 608 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 IRAK4Q9NWZ3 460 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 C11orf21Q9P2W6 132 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 FEZ2Q9UHY8 353 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 SERPINB13Q9UIV8 391 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PIK3C2GO75747 1445 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 PIK3R4Q99570 1358 aa4.78□□□□□ -1.64
PDLIM1P4-201ENST00000504327 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ASXL1Q8IXJ9 1541 aa4.77□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NKTRP30414 1462 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms