RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PCSK1P29120 753 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 MAGEA4P43358 317 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 FLT3LGP49771 235 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 ZNF135P52742 658 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CDH6P55285 790 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 HNRNPH2P55795 449 aaKnown RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 MAGOHP61326 146 aaKnown RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 HTRA3P83110 453 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 ZNF200P98182 395 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 OTUD4Q01804 1114 aaKnown RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 ORC1Q13415 861 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 DPYSL2Q16555 572 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 PTGISQ16647 500 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 DNAJC21Q5F1R6 531 aaKnown RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 GLRA4Q5JXX5 417 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 ERMARDQ5T6L9 678 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 RNASEH2BQ5TBB1 312 aaKnown RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 SLC9A4Q6AI14 798 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CCSAPQ6IQ19 270 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CYP4V2Q6ZWL3 525 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CENPUQ71F23 418 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CCDC25Q86WR0 208 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 RFX6Q8HWS3 928 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 SCML4Q8N228 414 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 B3GALNT2Q8NCR0 500 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 SMC1BQ8NDV3 1235 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 TRIB2Q92519 343 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 P3H4Q92791 437 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 LENG1Q96BZ8 264 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 RBM15Q96T37 977 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 SLC9A7Q96T83 725 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 APOL6Q9BWW8 343 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CENPHQ9H3R5 247 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 CCDC134Q9H6E4 229 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 NINJ2Q9NZG7 142 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 BCCIPQ9P287 314 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 PRDM4Q9UKN5 801 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 DSEQ9UL01 958 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 FARP1Q9Y4F1 1045 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 PTCH2Q9Y6C5 1203 aa10.24□□□□□ -0.77
COL1A1-210ENST00000504289 ATXN2Q99700 1313 aaKnown RBP10.24□□□□□ -0.77
COL1A1-210ENST00000504289 BCLAF3A2AJT9 711 aaKnown RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 ERICH4A6NGS2 130 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 E7ESA3 106 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 EBAG9O00559 213 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CYB561D2O14569 222 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 SPAG6O75602 509 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 FAM107AO95990 144 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CHRNA1P02708 482 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 SHBGP04278 402 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 RBP3P10745 1247 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 FGFR1P11362 822 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 NPR3P17342 541 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 PTPN1P18031 435 aaKnown RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CTGFP29279 349 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 MATKP42679 507 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 MAGEA6P43360 314 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 ARL4CP56559 192 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 EIF3EP60228 445 aaKnown RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 SOX4Q06945 474 aaPredicted RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 GPS1Q13098 491 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 AUHQ13825 339 aaKnown RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 DPYSL3Q14195 570 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 KRT81Q14533 505 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 DSC3Q14574 896 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 SLC25A52Q3SY17 297 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 GDF6Q6KF10 455 aaPredicted RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CXCL17Q6UXB2 119 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 MICALCLQ6ZW33 695 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 ARRDC4Q8NCT1 418 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 BCAS4Q8TDM0 211 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 FAM172AQ8WUF8 416 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 NT5C3BQ969T7 300 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 TSEN34Q9BSV6 310 aaKnown RBP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 TRIM62Q9BVG3 475 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CALN1Q9BXU9 219 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 PCDH18Q9HCL0 1135 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 XPNPEP3Q9NQH7 507 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 FAM49BQ9NUQ9 324 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 KLHL11Q9NVR0 708 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 SENP1Q9P0U3 644 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 PCSK1NQ9UHG2 260 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 CDH9Q9ULB4 789 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 NME7Q9Y5B8 376 aa10.23□□□□□ -0.77
COL1A1-210ENST00000504289 SF3B1O75533 1304 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL1A1-210ENST00000504289 A0A0U1RQF3 1178 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 GMNCA6NCL1 334 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 MYADML2A6NDP7 307 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 HACD1B0YJ81 288 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 C9IYK1 514 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 APOL1O14791 398 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 TRAPPC3O43617 180 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 DAB1O75553 588 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 CYP11A1P05108 521 aa10.22□□□□□ -0.77
COL1A1-210ENST00000504289 PDGFRBP09619 1106 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms