RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TRIM24O15164 1050 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 NEMFO60524 1076 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 TULP3O75386 442 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 TOM1L1O75674 476 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 CLTAP09496 248 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 CCT8P50990 548 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 PDE6CP51160 858 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 UCNP55089 124 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 NFATC3Q12968 1075 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 C9orf57Q5W0N0 161 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 SDE2Q6IQ49 451 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 BLOC1S2Q6QNY1 142 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 TERB1Q8NA31 727 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 ZNF248Q8NDW4 579 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 HAPLN2Q9GZV7 340 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 BHMT2Q9H2M3 363 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 RPF1Q9H9Y2 349 aaKnown RBP13.45□□□□□ -0.26
LSM6-204ENST00000504181 KCNK4Q9NYG8 393 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.45□□□□□ -0.26
LSM6-204ENST00000504181 CPQQ9Y646 472 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 SLCO1B1Q9Y6L6 691 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 NOTCH2Q04721 2471 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 ARID1BQ8NFD5 2236 aaPredicted RBP13.44□□□□□ -0.26
LSM6-204ENST00000504181 E2F8A0AVK6 867 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 SLC16A4O15374 487 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 CLDN3O15551 220 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 TSPY1Q01534 308 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 NR5A1Q13285 461 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 INAVAQ3KP66 663 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 ZNF574Q6ZN55 896 aaPredicted RBP13.44□□□□□ -0.26
LSM6-204ENST00000504181 SCN4BQ8IWT1 228 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 ETFBKMTQ8IXQ9 262 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 CADM4Q8NFZ8 388 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 SNX19Q92543 992 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 DEC1Q9P2X7 70 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 ANKRD6Q9Y2G4 727 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 BSNQ9UPA5 3926 aa13.44□□□□□ -0.26
LSM6-204ENST00000504181 USP9YO00507 2555 aaPredicted RBP13.44□□□□□ -0.26
LSM6-204ENST00000504181 METTL12A8MUP2 240 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 H0Y8X5 98 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 PIRO00625 290 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 TERTO14746 1132 aaKnown RBP13.43□□□□□ -0.26
LSM6-204ENST00000504181 PCDHGA12O60330 932 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 PAX3P23760 479 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 AFF3P51826 1226 aaKnown RBP13.43□□□□□ -0.26
LSM6-204ENST00000504181 PCBP4P57723 403 aaKnown RBP13.43□□□□□ -0.26
LSM6-204ENST00000504181 GAD2Q05329 585 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 MCL1Q07820 350 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 STRN3Q13033 797 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 ENOX2Q16206 610 aaKnown RBP13.43□□□□□ -0.26
LSM6-204ENST00000504181 NFE2Q16621 373 aaPredicted RBP13.43□□□□□ -0.26
LSM6-204ENST00000504181 CCDC142Q17RM4 750 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 KIAA1614Q5VZ46 1190 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 BTBD8Q5XKL5 378 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 FBXL19Q6PCT2 694 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 LAYNQ6UX15 382 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 NUDT18Q6ZVK8 323 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 C1orf216Q8TAB5 229 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 MTMR9Q96QG7 549 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 GABRG3Q99928 467 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
LSM6-204ENST00000504181 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
LSM6-204ENST00000504181 DTNBO60941 627 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 HIP1RO75146 1068 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 MYF5P13349 255 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 RPA1P27694 616 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 SLC7A9P82251 487 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 NFKB2Q00653 900 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 VAC14Q08AM6 782 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 STK3Q13188 491 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 DAW1Q8N136 415 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 FBXL16Q8N461 479 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 LEO1Q8WVC0 666 aaPredicted RBP13.42□□□□□ -0.26
LSM6-204ENST00000504181 TSC1Q92574 1164 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 IGSF8Q969P0 613 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 CNDP2Q96KP4 475 aaKnown RBP13.42□□□□□ -0.26
LSM6-204ENST00000504181 TMEM60Q9H2L4 133 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 USP36Q9P275 1121 aaKnown RBP13.42□□□□□ -0.26
LSM6-204ENST00000504181 STARD13Q9Y3M8 1113 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
LSM6-204ENST00000504181 PAXBP1Q9Y5B6 917 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
LSM6-204ENST00000504181 ANO9A1A5B4 782 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 WASH3PC4AMC7 463 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 KRT38O76015 456 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 LDOC1O95751 146 aaPredicted RBP13.41□□□□□ -0.26
LSM6-204ENST00000504181 CDK4P11802 303 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 GLDCP23378 1020 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 GRIK1P39086 918 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 ACADVLP49748 655 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 TAF6P49848 677 aa13.41□□□□□ -0.26
LSM6-204ENST00000504181 PDIA5Q14554 519 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms