RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ANXA11P50995 505 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZNF134P52741 427 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 WNT3P56703 355 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 LILRA4P59901 499 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 TAP2Q03519 686 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 KRT17Q04695 432 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 BTKQ06187 659 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 CHAF1AQ13111 956 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 DYRK1AQ13627 763 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 PMS2P11Q13670 270 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 SF3B3Q15393 1217 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 TWIST1Q15672 202 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ARL13BQ3SXY8 428 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 PREPLQ4J6C6 727 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 TSTD2Q5T7W7 516 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 RRAGBQ5VZM2 374 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 LAYNQ6UX15 382 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZDHHC24Q6UX98 284 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 DLK2Q6UY11 383 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 SDR16C5Q8N3Y7 309 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 SMRP1Q8NCR6 262 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 MORC4Q8TE76 937 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 IPCEF1Q8WWN9 437 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 BRI3BPQ8WY22 251 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 SNX19Q92543 992 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 TMEM125Q96AQ2 219 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZC3H10Q96K80 434 aaKnown RBP2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 MESP1Q9BRJ9 268 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 COLEC11Q9BWP8 271 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 INTS13Q9NVM9 706 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 CDC23Q9UJX2 597 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 ADAM21Q9UKJ8 722 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 CEP83Q9Y592 693 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 PCDHGB2Q9Y5G2 931 aa2.93□□□□□ -1.94
HMGB1P35-201ENST00000503360 LOC102723971A0A1B0GUV8 181 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 WDR27A2RRH5 827 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 F5H423 210 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 F5H697 171 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 hCG_1984214I3L0E3 225 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 RAB27BO00194 218 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 KRT86O43790 486 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 SOAT2O75908 522 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 BTF3P20290 206 aaKnown RBP2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 FGFR2P21802 821 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 MT3P25713 68 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 IL1R2P27930 398 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 PPM1AP35813 382 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 NR4A2P43354 598 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 NPTX2P47972 431 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 NDUFV1P49821 464 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 LOXL3P58215 753 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 RPS7P62081 194 aaKnown RBP2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 SATB1Q01826 763 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 STK3Q13188 491 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 KRT81Q14533 505 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 SLC29A2Q14542 456 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 GEN1Q17RS7 908 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 MGAT5BQ3V5L5 792 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 DGKKQ5KSL6 1271 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 TMEM108Q6UXF1 575 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 BEND5Q7L4P6 421 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 TMPRSS9Q7Z410 1059 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 GAS2L3Q86XJ1 694 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZNF280BQ86YH2 543 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 YAF2Q8IY57 180 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 ADGRG5Q8IZF4 528 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 FAM9AQ8IZU1 332 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 TXLNBQ8N3L3 684 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 ENAHQ8N8S7 591 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 LRRC46Q96FV0 321 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 PPP1R9BQ96SB3 815 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 VPS33BQ9H267 617 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 MYO1AQ9UBC5 1043 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 ZNF212Q9UDV6 495 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 MID2Q9UJV3 735 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 SHOC2Q9UQ13 582 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 MAN2B2Q9Y2E5 1009 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 LRCH1Q9Y2L9 728 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 MRPS17Q9Y2R5 130 aaKnown RBP2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 RIPOR2Q9Y4F9 1068 aa2.92□□□□□ -1.94
HMGB1P35-201ENST00000503360 A0A0B4J269 797 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 H7C4K7 107 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 AREL1O15033 823 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 TRIAP1O43715 76 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 TOP3BO95985 862 aaKnown RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ELFN1P0C7U0 828 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 KRT10P13645 584 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 GATA3P23771 443 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 EEF1GP26641 437 aaKnown RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ACVR2AP27037 513 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 LRPAP1P30533 357 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 IL6STP40189 918 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 TECP42680 631 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 HSPA7P48741 367 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ITGA8P53708 1063 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 TUBB3Q13509 450 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 ARHGEF7Q14155 803 aa2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 HLXQ14774 488 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P35-201ENST00000503360 INSCQ1MX18 579 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms