RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 RTN3O95197 1032 aaPredicted RBP17.23■□□□□ 0.35
SCLT1-204ENST00000503215 CYP17A1P05093 508 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 P4HA1P13674 534 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 ADORA2BP29275 332 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 SLC6A11P48066 632 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 PDE6CP51160 858 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 MAP3K7CLP57077 242 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 AMPD2Q01433 879 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 GPRIN1Q7Z2K8 1008 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 WDR5BQ86VZ2 330 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 RPLP0P6Q8NHW5 317 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 RAB23Q9ULC3 237 aa17.23■□□□□ 0.35
SCLT1-204ENST00000503215 MYOFQ9NZM1 2061 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 HELZP42694 1942 aaKnown RBP17.22■□□□□ 0.35
SCLT1-204ENST00000503215 ATP8B3O60423 1300 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 KIF20AO95235 890 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 ZDHHC11BP0C7U3 371 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 CD58P19256 250 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 PSMC2P35998 433 aaKnown RBP17.22■□□□□ 0.35
SCLT1-204ENST00000503215 PRCPP42785 496 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 DHCR24Q15392 516 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 LAIR1Q6GTX8 287 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 RHBDF2Q6PJF5 856 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 INTS8Q75QN2 995 aaKnown RBP17.22■□□□□ 0.35
SCLT1-204ENST00000503215 UNC93AQ86WB7 457 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 C12orf40Q86WS4 652 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 FAM160A2Q8N612 972 aaPredicted RBP17.22■□□□□ 0.35
SCLT1-204ENST00000503215 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 JAKMIP2Q96AA8 810 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 CSNK1G1Q9HCP0 422 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 DLL3Q9NYJ7 618 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 GMEB2Q9UKD1 530 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 USP18Q9UMW8 372 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 SLC8A2Q9UPR5 921 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 CACNA1AO00555 2505 aa17.22■□□□□ 0.35
SCLT1-204ENST00000503215 FAM92AA1XBS5 289 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 HHLA1C9JL84 531 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 K7EQS6 105 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 NFATC1O95644 943 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 TBX18O95935 607 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 KRT13P13646 458 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 RPL13P26373 211 aaKnown RBP17.21■□□□□ 0.35
SCLT1-204ENST00000503215 PMS1P54277 932 aaKnown RBP17.21■□□□□ 0.35
SCLT1-204ENST00000503215 SEC13P55735 322 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 MCCD1P59942 119 aaPredicted RBP17.21■□□□□ 0.35
SCLT1-204ENST00000503215 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 NR1H3Q13133 447 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 HECTD3Q5T447 861 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 SNX30Q5VWJ9 437 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
SCLT1-204ENST00000503215 OSER1Q9NX31 292 aa17.21■□□□□ 0.35
SCLT1-204ENST00000503215 SPTBN2O15020 2390 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 ATG13O75143 517 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 RETP07949 1114 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 CNR2P34972 360 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 EDRF1Q3B7T1 1238 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 CLEC20AQ6ZU45 233 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 CEP68Q76N32 757 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 KBTBD6Q86V97 674 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 USP33Q8TEY7 942 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 OVCA2Q8WZ82 227 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 TATDN2Q93075 761 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 CYFIP2Q96F07 1278 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
SCLT1-204ENST00000503215 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 CYP3A43Q9HB55 503 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 TMEM8AQ9HCN3 771 aa17.2■□□□□ 0.34
SCLT1-204ENST00000503215 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.2■□□□□ 0.34
SCLT1-204ENST00000503215 MED19A0JLT2 244 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-204ENST00000503215 CILPO75339 1184 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-204ENST00000503215 DMC1Q14565 340 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCLT1-204ENST00000503215 CCDC6Q16204 474 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 FBXO43Q4G163 708 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 ZNF394Q53GI3 561 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 C2orf27AQ580R0 203 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 EMC10Q5UCC4 262 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 ANKRD40Q6AI12 368 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 ERMP1Q7Z2K6 904 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 DGLUCYQ7Z3D6 616 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 BBS7Q8IWZ6 715 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 CCDC33Q8N5R6 958 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 PDZD8Q8NEN9 1154 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 GAB3Q8WWW8 586 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 ARID3AQ99856 593 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 NT5C1AQ9BXI3 368 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 PCDHA5Q9Y5H7 936 aa17.19■□□□□ 0.34
SCLT1-204ENST00000503215 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 DCLK1O15075 740 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 AXIN1O15169 862 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 CYP26A1O43174 497 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 RPP40O75818 363 aaKnown RBP17.18■□□□□ 0.34
SCLT1-204ENST00000503215 FAM200BP0CF97 657 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 IRF1P10914 325 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCLT1-204ENST00000503215 LY6G5CQ5SRR4 150 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
SCLT1-204ENST00000503215 SYT13Q7L8C5 426 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms