RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CPA3P15088 417 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 SLC1A6P48664 564 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 ZBTB49Q6ZSB9 765 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.82■□□□□ 0.445e-11■■■■□ 22.4
HMGXB3-201ENST00000502717 TNIP2Q8NFZ5 429 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 LENG1Q96BZ8 264 aaPredicted RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 E9PBE3 544 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 KLHL41O60662 606 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 ALBP02768 609 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 SREBF2Q12772 1141 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 RWDD4Q6NW29 188 aaKnown RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 RIN3Q8TB24 985 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 SH3TC2Q8TF17 1288 aa17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 JPH1Q9HDC5 661 aaPredicted RBP17.82■□□□□ 0.44
HMGXB3-201ENST00000502717 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 RPS6KA3P51812 740 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 ITGA9Q13797 1035 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 BMPR2Q13873 1038 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 PTK2BQ14289 1009 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 CLNKQ7Z7G1 428 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 POU5F2Q8N7G0 328 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 DACH2Q96NX9 599 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 MYRFQ9Y2G1 1151 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 E2F8A0AVK6 867 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 PROCP04070 461 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 PSMA4P25789 261 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 PHKA2P46019 1235 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 KCNT1Q5JUK3 1230 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 MICALL2Q8IY33 904 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 CCDC33Q8N5R6 958 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 AGAP3Q96P47 875 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 GRIP2Q9C0E4 1043 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 PSMD3O43242 534 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 GYS1P13807 737 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 PAIP1Q9H074 479 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 DRG1Q9Y295 367 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 SDR42E2A6NKP2 422 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 CYP24A1Q07973 514 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 TSHZ1Q6ZSZ6 1077 aa17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 DGCR14Q96DF8 476 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-201ENST00000502717 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 FAM237BA0A1B0GVD1 139 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 SFSWAPQ12872 951 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 SPP2Q13103 211 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 PLD3Q8IV08 490 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 PRPF4O43172 522 aaKnown RBP eCLIP17.8■□□□□ 0.443e-7■■■■□ 23.9
HMGXB3-201ENST00000502717 TBC1D12O60347 775 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 TSHRP16473 764 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 IFNEQ86WN2 208 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 TMCO5AQ8N6Q1 288 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 RBM46Q8TBY0 533 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 ZNF669Q96BR6 464 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 DENND2DQ9H6A0 471 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 TCF7L2Q9NQB0 619 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 ASTN1O14525 1302 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 MYL3P08590 195 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 PDK1Q15118 436 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 PDK2Q15119 407 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 ASTE1Q2TB18 679 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 PLEKHA7Q6IQ23 1121 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 STYK1Q6J9G0 422 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 FAR2Q96K12 515 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 C3orf70A6NLC5 250 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 SNX2O60749 519 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 GH1P01241 217 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 NR1H2P55055 460 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 LAYNQ6UX15 382 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 HAS1Q92839 578 aa17.8■□□□□ 0.44
HMGXB3-201ENST00000502717 RDM1Q8NG50 284 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 TMEM143Q96AN5 459 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 UMODL1Q5DID0 1318 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 ALDH1A3P47895 512 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 TSPAN17Q96FV3 270 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 RTFDC1Q9BY42 306 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 MRPS26Q9BYN8 205 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 ZNF839A8K0R7 811 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 TRDMT1O14717 391 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 FGRP09769 529 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 VAV1P15498 845 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 LIN52Q52LA3 116 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 KYAT3Q6YP21 454 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 NUP93Q8N1F7 819 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 PARK7Q99497 189 aaKnown RBP17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 SLC39A10Q9ULF5 831 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 F8W8V4 182 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 PRKCBP05771 671 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 MMP14P50281 582 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 RNF217Q8TC41 542 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 DLG3Q92796 817 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 PTPRN2Q92932 1015 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 AGAP1Q9UPQ3 857 aa17.79■□□□□ 0.44
HMGXB3-201ENST00000502717 RTN3O95197 1032 aaPredicted RBP17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 PGM3O95394 542 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 TPBGLP0DKB5 382 aa17.78■□□□□ 0.44
HMGXB3-201ENST00000502717 ME2P23368 584 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms