RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SIM1P81133 766 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-212ENST00000498540 IFRD2Q12894 506 aaPredicted RBP15.66■□□□□ 0.1
TRAF4-212ENST00000498540 SEMA3BQ13214 749 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 LY6G5CQ5SRR4 150 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 HS2ST1Q7LGA3 356 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 PGBD3Q8N328 593 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 GLIS3Q8NEA6 775 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 ZNF518BQ9C0D4 1074 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 DPEP3Q9H4B8 488 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 PANK4Q9NVE7 773 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 EHD2Q9NZN4 543 aa15.66■□□□□ 0.1
TRAF4-212ENST00000498540 A0A087X0B3 334 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 TNFRSF4P43489 277 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 RING1Q06587 406 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 DUOXA2Q1HG44 320 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 SPDYCQ5MJ68 293 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 TDRD10Q5VZ19 366 aaKnown RBP15.65■□□□□ 0.1
TRAF4-212ENST00000498540 DEFB119Q8N690 84 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 ZFRQ96KR1 1074 aaKnown RBP15.65■□□□□ 0.1
TRAF4-212ENST00000498540 SLITRK1Q96PX8 696 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 GTPBP2Q9BX10 602 aaKnown RBP15.65■□□□□ 0.1
TRAF4-212ENST00000498540 MSRB2Q9Y3D2 182 aa15.65■□□□□ 0.1
TRAF4-212ENST00000498540 SRPRBQ9Y5M8 271 aaKnown RBP15.65■□□□□ 0.1
TRAF4-212ENST00000498540 ZNF233A6NK53 670 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 UPK3BL1B0FP48 263 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-212ENST00000498540 UPK3BL2E5RIL1 263 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 CLDN5O00501 218 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 GABRG2P18507 467 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 HOXD12P35452 270 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 GNL1P36915 607 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-212ENST00000498540 TXLNAP40222 546 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 FAM193AP78312 1265 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 RPL6Q02878 288 aaKnown RBP15.64■□□□□ 0.09
TRAF4-212ENST00000498540 BYSLQ13895 437 aaKnown RBP15.64■□□□□ 0.09
TRAF4-212ENST00000498540 TRAPPC11Q7Z392 1133 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 DDX42Q86XP3 938 aaKnown RBP eCLIP15.64■□□□□ 0.093e-8■■■□□ 16.5
TRAF4-212ENST00000498540 WDR49Q8IV35 697 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 ETFBKMTQ8IXQ9 262 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 ZNF513Q8N8E2 541 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-212ENST00000498540 NAT16Q8N8M0 369 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 NBEAQ8NFP9 2946 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 OR2I1PQ8NGU4 316 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 OR6B3Q8NGW1 331 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 HPS3Q969F9 1004 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 PANK2Q9BZ23 570 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 SNX25Q9H3E2 840 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 HSPBP1Q9NZL4 362 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 TBC1D14Q9P2M4 693 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 HCN2Q9UL51 889 aa15.64■□□□□ 0.09
TRAF4-212ENST00000498540 E2F8A0AVK6 867 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 VPS37CA5D8V6 355 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-212ENST00000498540 KIAA0391O15091 583 aaKnown RBP15.63■□□□□ 0.09
TRAF4-212ENST00000498540 AP5Z1O43299 807 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 COCHO43405 550 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 TULP3O75386 442 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 TACC1O75410 805 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 CST3P01034 146 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-212ENST00000498540 PTPN1P18031 435 aaKnown RBP15.63■□□□□ 0.09
TRAF4-212ENST00000498540 HOXD13P35453 343 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 STAT6P42226 847 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 DPP6P42658 865 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 GAD2Q05329 585 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 SURF1Q15526 300 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 DUOXA1Q1HG43 343 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 LRSAM1Q6UWE0 723 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 MIB1Q86YT6 1006 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 WBP2Q969T9 261 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 B3GNT5Q9BYG0 378 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 ELOVL4Q9GZR5 314 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 CAPN10Q9HC96 672 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 CALCOCO1Q9P1Z2 691 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 SLC6A14Q9UN76 642 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 LHX6Q9UPM6 363 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-212ENST00000498540 ITPR1Q14643 2758 aa15.63■□□□□ 0.09
TRAF4-212ENST00000498540 FASNP49327 2511 aaKnown RBP15.62■□□□□ 0.09
TRAF4-212ENST00000498540 FREM2Q5SZK8 3169 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 TBC1D3BA6NDS4 549 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 TRIM24O15164 1050 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 HOXC11O43248 304 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-212ENST00000498540 SERPINF2P08697 491 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 DLATP10515 647 aaKnown RBP15.62■□□□□ 0.09
TRAF4-212ENST00000498540 YWHAQP27348 245 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 WASP42768 502 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 ATXN3P54252 364 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-212ENST00000498540 GFPT1Q06210 699 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-212ENST00000498540 C10orf76Q5T2E6 689 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 FAM173BQ6P4H8 233 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 CCDC73Q6ZRK6 1079 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 BBS7Q8IWZ6 715 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 NUP93Q8N1F7 819 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 HDDC3Q8N4P3 179 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 CHCHD4Q8N4Q1 142 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 MINDY1Q8N5J2 469 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 TERB1Q8NA31 727 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 B3GALNT2Q8NCR0 500 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 CEP76Q8TAP6 659 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 FBXO32Q969P5 355 aa15.62■□□□□ 0.09
TRAF4-212ENST00000498540 ERLEC1Q96DZ1 483 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms